RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 SKIV2L2P42285 1042 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 MSLNQ13421 630 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 RAPGEF1Q13905 1077 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 LRRC49Q8IUZ0 686 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TTC8Q8TAM2 541 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 ATXN2LQ8WWM7 1075 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 COA7Q96BR5 231 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 MTMR8Q96EF0 704 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 HSPBAP1Q96EW2 488 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 SELENOSQ9BQE4 189 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 MTFR1LQ9H019 292 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 DCLRE1BQ9H816 532 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 BMP2KQ9NSY1 1161 aaPredicted RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 PTTG2Q9NZH5 202 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 SIK3Q9Y2K2 1263 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 SPECC1L-ADORA2AF8WAN1 911 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TDP2O95551 362 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 CDK4P11802 303 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 POLR2FP61218 127 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TRADDQ15628 312 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 FAM209AQ5JX71 171 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 KLHL35Q6PF15 583 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 TTC39CQ8N584 583 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 RXFP1Q9HBX9 757 aa13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 SRP68Q9UHB9 627 aaKnown RBP13.04□□□□□ -0.32
SMARCA4-217ENST00000591595 UNC5CO95185 931 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PRLRP16471 622 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 GSTO1P78417 241 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 GRB10Q13322 594 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 WDR78Q5VTH9 848 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 NEK10Q6ZWH5 1172 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 FITM2Q8N6M3 262 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 MARCH10Q8NA82 808 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 GLIS3Q8NEA6 775 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 UBLCP1Q8WVY7 318 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 GAB3Q8WWW8 586 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 CCDC127Q96BQ5 260 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 AASDHPPTQ9NRN7 309 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 SALL4Q9UJQ4 1053 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PNMA2Q9UL42 364 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PACSIN2Q9UNF0 486 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PLCH1Q4KWH8 1693 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 BTBD19C9JJ37 291 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 ENTPD5O75356 428 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 LMNAP02545 664 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 LDHCP07864 332 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 EHHADHQ08426 723 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PPIDQ08752 370 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 PTPROQ16827 1216 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 GUF1Q8N442 669 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 CEP70Q8NHQ1 597 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 DPH5Q9H2P9 285 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 ITGB4P16144 1822 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 ARAP2Q8WZ64 1704 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 A0A1W2PQ67 120 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 HGSO14964 777 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 KRT18P05783 430 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 RXRBP28702 533 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 RGS2P41220 211 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 RXRGP48443 463 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 CDK8P49336 464 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 RELAQ04206 551 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 LRRC63Q05C16 580 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 ZCWPW2Q504Y3 356 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 LMBRD2Q68DH5 695 aaPredicted RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 TPTE2Q6XPS3 522 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 ZNF804AQ7Z570 1209 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 SIX5Q8N196 739 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 KRT12Q99456 494 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 LSM14BQ9BX40 385 aaKnown RBP13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 NYXQ9GZU5 481 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 BLOC1S4Q9NUP1 217 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 CLIC5Q9NZA1 410 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 NOX1Q9Y5S8 564 aa13.03□□□□□ -0.32
SMARCA4-217ENST00000591595 MATN2O00339 956 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 PALMO75781 387 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 OAS1P00973 400 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 WASHC2DQ5SRD0 308 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 KLHL7Q8IXQ5 586 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 ST13P4Q8IZP2 240 aaPredicted RBP13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 CEP95Q96GE4 821 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 PRMT1Q99873 361 aaKnown RBP13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 SPZ1Q9BXG8 430 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 TLR10Q9BXR5 811 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 CCPG1Q9ULG6 757 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 TBC1D30Q9Y2I9 924 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.32
SMARCA4-217ENST00000591595 CACNA1SQ13698 1873 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 SPDYE16A6NNV3 312 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 CSE1LP55060 971 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 GRIK5Q16478 980 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 DEPDC1Q5TB30 811 aa13.02□□□□□ -0.33
SMARCA4-217ENST00000591595 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms