RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 USP41Q3LFD5 358 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 RARS2Q5T160 578 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 KIAA0319Q5VV43 1072 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 PDXDC1Q6P996 788 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 MAEAQ7L5Y9 396 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 OTOP3Q7RTS5 596 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 GPR149Q86SP6 731 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 ZBTB33Q86T24 672 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 GPIHBP1Q8IV16 184 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 SUGP1Q8IWZ8 645 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 TDRD5Q8NAT2 981 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 SNX29Q8TEQ0 813 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 ACSF2Q96CM8 615 aaPredicted RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 DRC1Q96MC2 740 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 ZFP42Q96MM3 310 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 APOL6Q9BWW8 343 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 APOL5Q9BWW9 433 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 CCDC113Q9H0I3 377 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 BHMT2Q9H2M3 363 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 PLEKHA4Q9H4M7 779 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 POMKQ9H5K3 350 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 PDZD7Q9H5P4 517 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 DDX19AQ9NUU7 478 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 FNIP2Q9P278 1114 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 PARP2Q9UGN5 583 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 ADAM28Q9UKQ2 775 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 SORCS3Q9UPU3 1222 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 KIAA1024Q9UPX6 916 aa8.38□□□□□ -1.07
NPC1-208ENST00000590301 RBM19Q9Y4C8 960 aaKnown RBP8.38□□□□□ -1.07
NPC1-208ENST00000590301 NLRC5Q86WI3 1866 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 A0A087WWV3 80 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 H3BQV1 296 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 K7ERI5 159 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 TEX28O15482 410 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 TADA2AO75478 443 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 PAPLNO95428 1278 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 BMP15O95972 392 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 GLUD1P00367 558 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 SSBP05455 408 aaKnown RBP eCLIP8.37□□□□□ -1.07
NPC1-208ENST00000590301 THP07101 528 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 PDIA4P13667 645 aaKnown RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 SCP2P22307 547 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 AKAP5P24588 427 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 TOB1P50616 345 aaPredicted RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 HSP90AA2PQ14568 343 aaPredicted RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 ARL6IP4Q66PJ3 421 aaKnown RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 FUT10Q6P4F1 479 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 CCDC149Q6ZUS6 474 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 FBXL6Q8N531 539 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 GSTCDQ8NEC7 633 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 BSNDQ8WZ55 320 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 STAMQ92783 540 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 PBXIP1Q96AQ6 731 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 TMX3Q96JJ7 454 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 NT5C3AQ9H0P0 336 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 TOPORSQ9NS56 1045 aaPredicted RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 ZDHHC7Q9NXF8 308 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 KCND2Q9NZV8 630 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 TNFSF13BQ9Y275 285 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.37□□□□□ -1.07
NPC1-208ENST00000590301 PCDHB6Q9Y5E3 794 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 MUC6Q6W4X9 2439 aa8.37□□□□□ -1.07
NPC1-208ENST00000590301 C2CD4DB7Z1M9 353 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 C2CD2LO14523 706 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 PTGESO14684 152 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 RECQL4O94761 1208 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 GUCY2CP25092 1073 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 PSEN1P49768 467 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 ATP2C1P98194 919 aaPredicted RBP8.36□□□□□ -1.07
NPC1-208ENST00000590301 DMP1Q13316 513 aaPredicted RBP8.36□□□□□ -1.07
NPC1-208ENST00000590301 HYIQ5T013 277 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 ATF7IP2Q5U623 682 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 MCTP1Q6DN14 999 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 TMC5Q6UXY8 1006 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 CDR2LQ86X02 465 aaPredicted RBP8.36□□□□□ -1.07
NPC1-208ENST00000590301 C12orf76Q8N812 135 aaPredicted RBP8.36□□□□□ -1.07
NPC1-208ENST00000590301 KREMEN2Q8NCW0 462 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 PIK3R5Q8WYR1 880 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 ASIC4Q96FT7 647 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 AK8Q96MA6 479 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 UROC1Q96N76 676 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 IRF2BPLQ9H1B7 796 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 TMEM134Q9H6X4 195 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 MAN1C1Q9NR34 630 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 MIOSQ9NXC5 875 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 KLK14Q9P0G3 267 aa8.36□□□□□ -1.07
NPC1-208ENST00000590301 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.36□□□□□ -1.07
NPC1-208ENST00000590301 CCDC169A6NNP5 214 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 H0YCG3 227 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 TMEM189-UBE2V1I3L0A0 370 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 TRAPPC3O43617 180 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 BRD1O95696 1058 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 MCF2P10911 925 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 LIG1P18858 919 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 GJB2P29033 226 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 GRM5P41594 1212 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 NPTX2P47972 431 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 SMTNP53814 917 aa8.35□□□□□ -1.07
NPC1-208ENST00000590301 YARSP54577 528 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms