RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 LNX1Q8TBB1 728 aaPredicted RBP14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 CCDC12Q8WUD4 166 aaPredicted RBP14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC7A3Q8WY07 619 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 CHAMP1Q96JM3 812 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 UBN1Q9NPG3 1134 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 DNMT3BQ9UBC3 853 aaKnown RBP14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 VAV3Q9UKW4 847 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 ZFYVE26Q68DK2 2539 aa14.25□□□□□ -0.13
PRKCSH-210ENST00000589990 COL4A2P08572 1712 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 CYP3A7-CYP3A51PA0A087WV96 503 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 TBC1D4O60343 1298 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 ERLIN2O94905 339 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 C1RP00736 705 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 CYP3A7P24462 503 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 HOXC13P31276 330 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 EMC2Q15006 297 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC5A9Q2M3M2 681 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 PPM1LQ5SGD2 360 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 Q6ZUG5 572 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SKAP1Q86WV1 359 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 CNNM3Q8NE01 707 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC7A14Q8TBB6 771 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 BICD2Q8TD16 824 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SECISBP2LQ93073 1101 aaKnown RBP14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 CSRNP2Q9H175 543 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 XPNPEP1Q9NQW7 623 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 GMEB2Q9UKD1 530 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 ASPMQ8IZT6 3477 aa14.24□□□□□ -0.13
PRKCSH-210ENST00000589990 SPEGQ15772 3267 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 CASTOR2A6NHX0 329 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 SLC30A4O14863 429 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 TADA2AO75478 443 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 KIF4AO95239 1232 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 NEFLP07196 543 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 HNRNPA1P09651 372 aaKnown RBP eCLIP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 ARF4P18085 180 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 KCNA4P22459 653 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 RPS9P46781 194 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 QARSP47897 775 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 RCAN1P53805 252 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 PTENP60484 403 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 MBTD1Q05BQ5 628 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 DMWDQ09019 674 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 SRSF5Q13243 272 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 HSP90AA2PQ14568 343 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 PSMD5Q16401 504 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 LIN9Q5TKA1 542 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 TANGO2Q6ICL3 276 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 NOTUMQ6P988 496 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 RSPO2Q6UXX9 243 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 CEP57Q86XR8 500 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 ASAP3Q8TDY4 903 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 BRF1Q92994 677 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 MCRS1Q96EZ8 462 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 JPH2Q9BR39 696 aaPredicted RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 NCOA5Q9HCD5 579 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 RGL1Q9NZL6 768 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 NDRG2Q9UN36 371 aaKnown RBP14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 GIT1Q9Y2X7 761 aa14.23□□□□□ -0.13
PRKCSH-210ENST00000589990 NID2Q14112 1375 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 FAM208BQ5VWN6 2430 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 INO80B-WBP1J3KQ70 363 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 M0R2N6 131 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 NR1I2O75469 434 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 NPTXRO95502 500 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 PFKPQ01813 784 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 GRM2Q14416 872 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 NPY5RQ15761 445 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 PABPC1LQ4VXU2 614 aaKnown RBP14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 AXDND1Q5T1B0 1012 aaPredicted RBP14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 PRR23BQ6ZRT6 265 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 GPR65Q8IYL9 337 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 PIK3R5Q8WYR1 880 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 BORCS6Q96GS4 357 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 TTPALQ9BTX7 342 aa14.22□□□□□ -0.13
PRKCSH-210ENST00000589990 TICRRQ7Z2Z1 1910 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 RALGAPA1Q6GYQ0 2036 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 CCDC196A0A1B0GTZ2 297 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 CEBPBP17676 345 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 FCARP24071 287 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 YWHABP31946 246 aaKnown RBP14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 RFC5P40937 340 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 MAGEA9P43362 315 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 NLRP5P59047 1200 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 ADCY1Q08828 1119 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 GRIK3Q13003 919 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 CAPSQ13938 189 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 TSGA10IPQ3SY00 556 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 RNF20Q5VTR2 975 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 ZNF852Q6ZMS4 543 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 CCDC148Q8NFR7 591 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 NETO1Q8TDF5 533 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 AIFM3Q96NN9 605 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 LXNQ9BS40 222 aa14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 RNF26Q9BY78 433 aaPredicted RBP14.21□□□□□ -0.13
PRKCSH-210ENST00000589990 SEMA4GQ9NTN9 838 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms