RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.45□□□□□ -0.58
ZNF540-208ENST00000589857 SLC9A2Q9UBY0 812 aa11.45□□□□□ -0.58
ZNF540-208ENST00000589857 TBX20Q9UMR3 447 aa11.45□□□□□ -0.58
ZNF540-208ENST00000589857 AFG3L2Q9Y4W6 797 aa11.45□□□□□ -0.58
ZNF540-208ENST00000589857 SLC16A4O15374 487 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 RNF40O75150 1001 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 RTN2O75298 545 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 GGPS1O95749 300 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CXCR5P32302 372 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 BPIFB4P59827 614 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 STRN3Q13033 797 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 MOGSQ13724 837 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 PLS1Q14651 629 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CBWD6Q4V339 395 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 XKR3Q5GH77 459 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CBWD3Q5JTY5 395 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CBWD5Q5RIA9 395 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CATSPERGQ6ZRH7 1159 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 GLYCTKQ8IVS8 523 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 EXOC8Q8IYI6 725 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 TDHQ8IZJ6 230 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 TMEM161BQ8NDZ6 487 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 FAM76AQ8TAV0 307 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 TRIM11Q96F44 468 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CEP170P1Q96L14 293 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 NT5C1BQ96P26 610 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 PSMB7Q99436 277 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 GDF15Q99988 308 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 SYT11Q9BT88 431 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 PLVAPQ9BX97 442 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 CARD9Q9H257 536 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 C11orf49Q9H6J7 331 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 UBE2TQ9NPD8 197 aaPredicted RBP11.44□□□□□ -0.58
ZNF540-208ENST00000589857 SEPT11Q9NVA2 429 aaKnown RBP11.44□□□□□ -0.58
ZNF540-208ENST00000589857 RASAL2Q9UJF2 1139 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 TMEM59LQ9UK28 342 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 FAN1Q9Y2M0 1017 aa11.44□□□□□ -0.58
ZNF540-208ENST00000589857 SYNGAP1Q96PV0 1343 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 DENND3A2RUS2 1198 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GOLGA6L10A6NI86 522 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 KRIT1O00522 736 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 LDHAP00338 332 aaKnown RBP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 ICAM3P32942 547 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 NPTX2P47972 431 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 LMAN1P49257 510 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 PDE6CP51160 858 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GPC3P51654 580 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GPC5P78333 572 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 STXBP2Q15833 593 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 SNRNP35Q16560 246 aaKnown RBP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 ARHGAP44Q17R89 818 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 CFAP58Q5T655 872 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 SLFN12LQ6IEE8 588 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 MAEAQ7L5Y9 396 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GPIHBP1Q8IV16 184 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 C7orf61Q8IZ16 206 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 C1orf131Q8NDD1 294 aaKnown RBP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 REPS2Q8NFH8 660 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 LMO3Q8TAP4 145 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 LNX1Q8TBB1 728 aaPredicted RBP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 SCFD2Q8WU76 684 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 BICD1Q96G01 975 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 HES6Q96HZ4 224 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 LRCH3Q96II8 777 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 RPS6KC1Q96S38 1066 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 KRT12Q99456 494 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 UBE2OQ9C0C9 1292 aaKnown RBP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 RAB17Q9H0T7 212 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 ISCUQ9H1K1 167 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 PCIF1Q9H4Z3 704 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 FAM114A2Q9NRY5 505 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 COQ4Q9Y3A0 265 aa11.43□□□□□ -0.58
ZNF540-208ENST00000589857 GOLGA6CA6NDK9 693 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 FAM187AA6NFU0 413 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 SPATA31C2B4DYI2 1134 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 RPS6KA5O75582 802 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 MTA2O94776 668 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 CCNE2O96020 404 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 SUPT20HL2P0C7V6 817 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GOLGA6DP0CG33 693 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 KCNA2P16389 499 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 ACTN2P35609 894 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 RFC5P40937 340 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GCLMP48507 274 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 HMGCS2P54868 508 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GUCY2DQ02846 1103 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 SPDYCQ5MJ68 293 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 FAM160B1Q5W0V3 765 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 LRIG3Q6UXM1 1119 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 NT5DC3Q86UY8 548 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 ZNF677Q86XU0 584 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 KSR1Q8IVT5 923 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 EFCAB13Q8IY85 973 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 GPD1LQ8N335 351 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 RDH13Q8NBN7 331 aa11.42□□□□□ -0.58
ZNF540-208ENST00000589857 FBXL13Q8NEE6 735 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms