RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 LIG1P18858 919 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 PRPHP41219 470 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 TUSC3Q13454 348 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 DTHD1Q6ZMT9 781 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 CCDC149Q6ZUS6 474 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 ASIC4Q96FT7 647 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 RHOBTB2Q9BYZ6 727 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 MAN1C1Q9NR34 630 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.83■□□□□ 0.12
MBD1-220ENST00000589758 DDX19AQ9NUU7 478 aaKnown RBP15.83■□□□□ 0.12
MBD1-220ENST00000589758 SNTG2Q9NY99 539 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 FNIP2Q9P278 1114 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 PHLPP2Q6ZVD8 1323 aa15.83■□□□□ 0.12
MBD1-220ENST00000589758 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
MBD1-220ENST00000589758 DCAF4L1Q3SXM0 396 aa15.82■□□□□ 0.12
MBD1-220ENST00000589758 RILPL1Q5EBL4 403 aa15.82■□□□□ 0.12
MBD1-220ENST00000589758 OTOP3Q7RTS5 596 aa15.82■□□□□ 0.12
MBD1-220ENST00000589758 GPR62Q9BZJ7 368 aa15.82■□□□□ 0.12
MBD1-220ENST00000589758 PLEKHA4Q9H4M7 779 aa15.82■□□□□ 0.12
MBD1-220ENST00000589758 TTLL13PA6NNM8 815 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 F8W810 466 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 K7ERI5 159 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 SF3B1O75533 1304 aaKnown RBP eCLIP15.81■□□□□ 0.12
MBD1-220ENST00000589758 RECQL4O94761 1208 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 MCTP1Q6DN14 999 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 DENND4AQ7Z401 1863 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 KCTD17Q8N5Z5 321 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 C17orf75Q9HAS0 396 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 LIMD1Q9UGP4 676 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 KCNG1Q9UIX4 513 aa15.81■□□□□ 0.12
MBD1-220ENST00000589758 CCDC195A0A1B0GUA6 201 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 E9PMD0 336 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 H3BQV1 296 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 PTGESO14684 152 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 GJB2P29033 226 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 PEX3P56589 373 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 NHLH1Q02575 133 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 ELAVL2Q12926 359 aaKnown RBP15.8■□□□□ 0.12
MBD1-220ENST00000589758 ATF7IP2Q5U623 682 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 EEF1DP3Q658K8 133 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 RIN2Q8WYP3 895 aaPredicted RBP15.8■□□□□ 0.12
MBD1-220ENST00000589758 STAMQ92783 540 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 DRC1Q96MC2 740 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 PAAF1Q9BRP4 392 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 KIFC3Q9BVG8 833 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 TMEM134Q9H6X4 195 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 POLD4Q9HCU8 107 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 SMC3Q9UQE7 1217 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 GDAQ9Y2T3 454 aa15.8■□□□□ 0.12
MBD1-220ENST00000589758 RBM19Q9Y4C8 960 aaKnown RBP15.8■□□□□ 0.12
MBD1-220ENST00000589758 ZNF318Q5VUA4 2279 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 CASTOR2A6NHX0 329 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 CCDC169A6NNP5 214 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 TGM5O43548 720 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 BRD1O95696 1058 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 EDN1P05305 212 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 NPTX2P47972 431 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 DMP1Q13316 513 aaPredicted RBP15.79■□□□□ 0.12
MBD1-220ENST00000589758 NT5DC1Q5TFE4 455 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 PDXDC1Q6P996 788 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 PALB2Q86YC2 1186 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 RABGGTAQ92696 567 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 B3GALT6Q96L58 329 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 TTPALQ9BTX7 342 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 TIPINQ9BVW5 301 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 WDR6Q9NNW5 1121 aaKnown RBP15.79■□□□□ 0.12
MBD1-220ENST00000589758 KMT5AQ9NQR1 393 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 ZDHHC7Q9NXF8 308 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 TNFSF13BQ9Y275 285 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.79■□□□□ 0.12
MBD1-220ENST00000589758 PLXNA3P51805 1871 aa15.79■□□□□ 0.12
MBD1-220ENST00000589758 PP2D1A8MPX8 630 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 HIP1RO75146 1068 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 PAPLNO95428 1278 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 ASGR2P07307 311 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 AVPR2P30518 371 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 NUBP1P53384 320 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 PTPN5P54829 565 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 ATP2C1P98194 919 aaPredicted RBP15.78■□□□□ 0.12
MBD1-220ENST00000589758 NAB2Q15742 525 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 IL17AQ16552 155 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 FAM171A1Q5VUB5 890 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 RINT1Q6NUQ1 792 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 LILRA6Q6PI73 481 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 UROC1Q96N76 676 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 NT5C3AQ9H0P0 336 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 FOXD4L1Q9NU39 408 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 IGSF9Q9P2J2 1179 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 CACNG4Q9UBN1 327 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 MYO10Q9HD67 2058 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 C2orf16Q68DN1 1984 aa15.78■□□□□ 0.12
MBD1-220ENST00000589758 MTCL1Q9Y4B5 1905 aaKnown RBP15.78■□□□□ 0.12
MBD1-220ENST00000589758 K7ELQ4 463 aaPredicted RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 KIF4AO95239 1232 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 SPATA31D3P0C874 917 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 CDC25AP30304 524 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 YARSP54577 528 aaKnown RBP15.77■□□□□ 0.12
MBD1-220ENST00000589758 RTP2Q5QGT7 225 aa15.77■□□□□ 0.12
MBD1-220ENST00000589758 HYIQ5T013 277 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms