RNA–Protein interactions for RNA: ENST00000589548.5

CXXC1-211, Transcript of CXXC finger protein 1, humanhuman

TSL 3

Gene CXXC1, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-211ENST00000589548 PCBP1Q15365 356 aaKnown RBP eCLIP19.94■□□□□ 0.78
CXXC1-211ENST00000589548 RSPO4Q2I0M5 234 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-211ENST00000589548 KLK14Q9P0G3 267 aa19.94■□□□□ 0.78
CXXC1-211ENST00000589548 CDH7Q9ULB5 785 aa19.94■□□□□ 0.78
CXXC1-211ENST00000589548 ZFP37Q9Y6Q3 630 aaPredicted RBP19.94■□□□□ 0.78
CXXC1-211ENST00000589548 KANSL1LA0AUZ9 987 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 KINO60870 393 aaKnown RBP19.93■□□□□ 0.78
CXXC1-211ENST00000589548 KRT37O76014 449 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 CYP4A11Q02928 519 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 GRIK3Q13003 919 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 GALNT17Q6IS24 598 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 SHDQ96IW2 340 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 CLSTN3Q9BQT9 956 aa19.93■□□□□ 0.78
CXXC1-211ENST00000589548 CHD8Q9HCK8 2581 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 ADAM12O43184 909 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 NPTXRO95502 500 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 CREMQ03060 361 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 MXD4Q14582 209 aaPredicted RBP19.92■□□□□ 0.78
CXXC1-211ENST00000589548 MLF2Q15773 248 aaPredicted RBP19.92■□□□□ 0.78
CXXC1-211ENST00000589548 NCAPH2Q6IBW4 605 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 PPP4R3AQ6IN85 833 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 OTUD6AQ7L8S5 288 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 NEK8Q86SG6 692 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 POTEDQ86YR6 584 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 ITFG1Q8TB96 612 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 HASPINQ8TF76 798 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 FGF13Q92913 245 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
CXXC1-211ENST00000589548 TRIM6Q9C030 488 aaPredicted RBP19.92■□□□□ 0.78
CXXC1-211ENST00000589548 SPATA6Q9NWH7 488 aaPredicted RBP19.92■□□□□ 0.78
CXXC1-211ENST00000589548 ZMYM2Q9UBW7 1377 aa19.92■□□□□ 0.78
CXXC1-211ENST00000589548 F5P12259 2224 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 CCL16O15467 120 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 GLRA2P23416 452 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 POU5F1BQ06416 359 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 HSP90AA2PQ14568 343 aaPredicted RBP19.91■□□□□ 0.78
CXXC1-211ENST00000589548 UBXN2BQ14CS0 331 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 ZNF528Q3MIS6 628 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 LNX1Q8TBB1 728 aaPredicted RBP19.91■□□□□ 0.78
CXXC1-211ENST00000589548 CNTNAP3BQ96NU0 1288 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 PHF20Q9BVI0 1012 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 CNTNAP3Q9BZ76 1288 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 ZSWIM4Q9H7M6 989 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 FBXO4Q9UKT5 387 aa19.91■□□□□ 0.78
CXXC1-211ENST00000589548 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 TBX3O15119 743 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 TADA2AO75478 443 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 SLITRK3O94933 977 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 KIF4AO95239 1232 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 C8AP07357 584 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 HNRNPA1P09651 372 aaKnown RBP eCLIP19.9■□□□□ 0.78
CXXC1-211ENST00000589548 GCFC2P16383 781 aaKnown RBP19.9■□□□□ 0.78
CXXC1-211ENST00000589548 CD72P21854 359 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 ARL2P36404 184 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 PRKCQQ04759 706 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 TFDP1Q14186 410 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 PSMD5Q16401 504 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 SLC44A4Q53GD3 710 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 EARS2Q5JPH6 523 aaKnown RBP19.9■□□□□ 0.78
CXXC1-211ENST00000589548 VARS2Q5ST30 1063 aaKnown RBP19.9■□□□□ 0.78
CXXC1-211ENST00000589548 SLC27A1Q6PCB7 646 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 HACE1Q8IYU2 909 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 FAM177A1Q8N128 213 aaPredicted RBP19.9■□□□□ 0.78
CXXC1-211ENST00000589548 OXER1Q8TDS5 423 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 PIK3R5Q8WYR1 880 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 KXD1Q9BQD3 176 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 BCO2Q9BYV7 579 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 CXCL16Q9H2A7 254 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 LTB4R2Q9NPC1 389 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 GJB4Q9NTQ9 266 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 PARP2Q9UGN5 583 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 SF3B1O75533 1304 aaKnown RBP eCLIP19.9■□□□□ 0.784e-7■■■■■ 40.1
CXXC1-211ENST00000589548 COL4A2P08572 1712 aa19.9■□□□□ 0.78
CXXC1-211ENST00000589548 A0A1B0GUA9 196 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 CASTOR2A6NHX0 329 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 CPLX1O14810 134 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 SPTLC1O15269 473 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 LAMTOR5O43504 91 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 CCNT1O60563 726 aaKnown RBP19.89■□□□□ 0.77
CXXC1-211ENST00000589548 PSMA5P28066 241 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 CSTF1Q05048 431 aaKnown RBP19.89■□□□□ 0.77
CXXC1-211ENST00000589548 NCBP1Q09161 790 aaKnown RBP19.89■□□□□ 0.77
CXXC1-211ENST00000589548 TUSC3Q13454 348 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 PPM1LQ5SGD2 360 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 LIN9Q5TKA1 542 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 FAM171A1Q5VUB5 890 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 PIK3AP1Q6ZUJ8 805 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 MTSS1LQ765P7 747 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 RUFY3Q7L099 469 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 TPH2Q8IWU9 490 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 TTPALQ9BTX7 342 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 NFKBIZQ9BYH8 718 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 HCFC1R1Q9NWW0 138 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 NCDNQ9UBB6 729 aa19.89■□□□□ 0.77
CXXC1-211ENST00000589548 FAM205CA6NFA0 338 aa19.88■□□□□ 0.77
CXXC1-211ENST00000589548 FAM170BA6NMN3 283 aa19.88■□□□□ 0.77
CXXC1-211ENST00000589548 PTGESO14684 152 aa19.88■□□□□ 0.77
CXXC1-211ENST00000589548 DTNBO60941 627 aa19.88■□□□□ 0.77
CXXC1-211ENST00000589548 HOXA9P31269 272 aa19.88■□□□□ 0.77
CXXC1-211ENST00000589548 STK3Q13188 491 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms