RNA–Protein interactions for RNA: ENST00000589532.5

LSM7-205, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 539 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-205ENST00000589532 LIMD1Q9UGP4 676 aa26.27■■□□□ 1.8
LSM7-205ENST00000589532 ADAM28Q9UKQ2 775 aa26.27■■□□□ 1.8
LSM7-205ENST00000589532 GLUD1P00367 558 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 C1RP00736 705 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 NAMPTP43490 491 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 NBR1Q14596 966 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 ZNF707Q96C28 371 aaPredicted RBP26.26■■□□□ 1.79
LSM7-205ENST00000589532 COLEC11Q9BWP8 271 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 CXCL16Q9H2A7 254 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 VWA8A3KMH1 1905 aa26.26■■□□□ 1.79
LSM7-205ENST00000589532 NR1I2O75469 434 aa26.25■■□□□ 1.79
LSM7-205ENST00000589532 CUL4AQ13619 759 aa26.25■■□□□ 1.79
LSM7-205ENST00000589532 HAUS3Q68CZ6 603 aa26.25■■□□□ 1.79
LSM7-205ENST00000589532 OTOP3Q7RTS5 596 aa26.25■■□□□ 1.79
LSM7-205ENST00000589532 FNIP2Q9P278 1114 aa26.25■■□□□ 1.79
LSM7-205ENST00000589532 ARHGEF35A5YM69 484 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 ACKR2O00590 384 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 N4BP3O15049 544 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 RFPL2O75678 378 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 PRKCBP05771 671 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 U2AF2P26368 475 aaKnown RBP eCLIP26.24■■□□□ 1.79
LSM7-205ENST00000589532 TUSC3Q13454 348 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 HSP90AA2PQ14568 343 aaPredicted RBP26.24■■□□□ 1.79
LSM7-205ENST00000589532 USP41Q3LFD5 358 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 LILRA6Q6PI73 481 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 CYP26C1Q6V0L0 522 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 HDAC7Q8WUI4 952 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 RABGGTAQ92696 567 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 ACSF2Q96CM8 615 aaPredicted RBP26.24■■□□□ 1.79
LSM7-205ENST00000589532 INTS4Q96HW7 963 aaKnown RBP26.24■■□□□ 1.79
LSM7-205ENST00000589532 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP26.24■■□□□ 1.791e-8■□□□□ 11.3
LSM7-205ENST00000589532 PARP2Q9UGN5 583 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 USP20Q9Y2K6 914 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 CFAP54Q96N23 3096 aa26.24■■□□□ 1.79
LSM7-205ENST00000589532 ZFHX2Q9C0A1 2572 aaPredicted RBP26.24■■□□□ 1.79
LSM7-205ENST00000589532 CLUHO75153 1309 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 RECQL4O94761 1208 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 KIF4AO95239 1232 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 TOB1P50616 345 aaPredicted RBP26.23■■□□□ 1.79
LSM7-205ENST00000589532 NUBP1P53384 320 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 PRPF4BQ13523 1007 aaKnown RBP26.23■■□□□ 1.79
LSM7-205ENST00000589532 GNL2Q13823 731 aaKnown RBP26.23■■□□□ 1.79
LSM7-205ENST00000589532 RTP2Q5QGT7 225 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 EEF1DP3Q658K8 133 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 TMEM105Q8N8V8 129 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 IGSF22Q8N9C0 903 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 KIFC3Q9BVG8 833 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 WDR6Q9NNW5 1121 aaKnown RBP26.23■■□□□ 1.79
LSM7-205ENST00000589532 SNTG2Q9NY99 539 aa26.23■■□□□ 1.79
LSM7-205ENST00000589532 SF3B1O75533 1304 aaKnown RBP eCLIP26.22■■□□□ 1.791e-8■■■■■ 160.4
LSM7-205ENST00000589532 SPDYE4A6NLX3 237 aa26.22■■□□□ 1.79
LSM7-205ENST00000589532 TGM5O43548 720 aa26.22■■□□□ 1.79
LSM7-205ENST00000589532 GJB2P29033 226 aa26.22■■□□□ 1.79
LSM7-205ENST00000589532 MAPK6Q16659 721 aa26.22■■□□□ 1.79
LSM7-205ENST00000589532 DPP7Q9UHL4 492 aa26.22■■□□□ 1.79
LSM7-205ENST00000589532 CCDC195A0A1B0GUA6 201 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 HSP90AA1P07900 732 aaKnown RBP26.21■■□□□ 1.79
LSM7-205ENST00000589532 PDCP20941 246 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 RIN2Q8WYP3 895 aaPredicted RBP26.21■■□□□ 1.79
LSM7-205ENST00000589532 BHMT2Q9H2M3 363 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 PLEKHA4Q9H4M7 779 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 KCNK12Q9HB15 430 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 DUSP12Q9UNI6 340 aa26.21■■□□□ 1.79
LSM7-205ENST00000589532 CASTOR2A6NHX0 329 aa26.2■■□□□ 1.78
LSM7-205ENST00000589532 RPL17P18621 184 aaKnown RBP26.2■■□□□ 1.78
LSM7-205ENST00000589532 CCT6AP40227 531 aaKnown RBP26.2■■□□□ 1.78
LSM7-205ENST00000589532 PPP2R5AQ15172 486 aa26.2■■□□□ 1.78
LSM7-205ENST00000589532 CWF19L1Q69YN2 538 aaKnown RBP26.2■■□□□ 1.78
LSM7-205ENST00000589532 DEPTORQ8TB45 409 aa26.2■■□□□ 1.78
LSM7-205ENST00000589532 ZDHHC7Q9NXF8 308 aa26.2■■□□□ 1.78
LSM7-205ENST00000589532 LRWD1Q9UFC0 647 aa26.2■■□□□ 1.78
LSM7-205ENST00000589532 NOL7Q9UMY1 257 aaKnown RBP26.2■■□□□ 1.78
LSM7-205ENST00000589532 H3BQV1 296 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 GALR2O43603 387 aaPredicted RBP26.19■■□□□ 1.78
LSM7-205ENST00000589532 SPATA31D3P0C874 917 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 MYBP10242 640 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 CREMQ03060 361 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 TDGQ13569 410 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 NT5DC1Q5TFE4 455 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 ELMSAN1Q6PJG2 1045 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 PRSS55Q6UWB4 352 aaPredicted RBP26.19■■□□□ 1.78
LSM7-205ENST00000589532 SPATA31D4Q6ZUB0 917 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 PALB2Q86YC2 1186 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 PIK3R5Q8WYR1 880 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 KIFAP3Q92845 792 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 EPS15L1Q9UBC2 864 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 PCDHB6Q9Y5E3 794 aa26.19■■□□□ 1.78
LSM7-205ENST00000589532 TRIP11Q15643 1979 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 PDIA5Q14554 519 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 IL17AQ16552 155 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 DCAF4L1Q3SXM0 396 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 DAW1Q8N136 415 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 SNX29Q8TEQ0 813 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 HASPINQ8TF76 798 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 SMG7Q92540 1137 aaKnown RBP26.18■■□□□ 1.78
LSM7-205ENST00000589532 MYADMQ96S97 322 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 NT5C3AQ9H0P0 336 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 POLD4Q9HCU8 107 aa26.18■■□□□ 1.78
LSM7-205ENST00000589532 DDX19AQ9NUU7 478 aaKnown RBP26.18■■□□□ 1.78
LSM7-205ENST00000589532 FAM86C1Q9NVL1 165 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms