RNA–Protein interactions for RNA: ENST00000589528.1

ACTN4-211, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 441 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-211ENST00000589528 PAPLNO95428 1278 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 STARD6P59095 220 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 GPC5P78333 572 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 MBTD1Q05BQ5 628 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 POU5F1BQ06416 359 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 SNW1Q13573 536 aaKnown RBP16.91■□□□□ 0.3
ACTN4-211ENST00000589528 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
ACTN4-211ENST00000589528 HSP90AA2PQ14568 343 aaPredicted RBP16.91■□□□□ 0.3
ACTN4-211ENST00000589528 UBXN2BQ14CS0 331 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 NPY5RQ15761 445 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 LILRA6Q6PI73 481 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 PRSS55Q6UWB4 352 aaPredicted RBP16.91■□□□□ 0.3
ACTN4-211ENST00000589528 PIK3AP1Q6ZUJ8 805 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 POTEDQ86YR6 584 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 DCLK2Q8N568 766 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 HASPINQ8TF76 798 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 FGF14Q92915 247 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 ZNF274Q96GC6 653 aaPredicted RBP16.91■□□□□ 0.3
ACTN4-211ENST00000589528 NCDNQ9UBB6 729 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 CYP46A1Q9Y6A2 500 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 PATJQ8NI35 1801 aa16.91■□□□□ 0.3
ACTN4-211ENST00000589528 CEP250Q9BV73 2442 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 KANSL1LA0AUZ9 987 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 DGAT1O75907 488 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 CDKL5O76039 1030 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 HNRNPA1P09651 372 aaKnown RBP eCLIP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 CAPSQ13938 189 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 MLF2Q15773 248 aaPredicted RBP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 TMEM132AQ24JP5 1023 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 PARM1Q6UWI2 310 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 CDR2LQ86X02 465 aaPredicted RBP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 IFNLR1Q8IU57 520 aaPredicted RBP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 HAS1Q92839 578 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 SECISBP2LQ93073 1101 aaKnown RBP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 LARP6Q9BRS8 491 aaKnown RBP16.9■□□□□ 0.3
ACTN4-211ENST00000589528 TTPALQ9BTX7 342 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 PHF20Q9BVI0 1012 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 XPNPEP1Q9NQW7 623 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 FBXW11Q9UKB1 542 aa16.9■□□□□ 0.3
ACTN4-211ENST00000589528 POTEMA6NI47 508 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 CCL16O15467 120 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 B4GALT5O43286 388 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 LRRN2O75325 713 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 C8AP07357 584 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 GLULP15104 373 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 NTHL1P78549 312 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 PFKPQ01813 784 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 PSMD5Q16401 504 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 RTP2Q5QGT7 225 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 POTEGQ6S5H5 508 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 ASAP3Q8TDY4 903 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 ATRIPQ8WXE1 791 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 RPP25Q9BUL9 199 aaKnown RBP16.89■□□□□ 0.29
ACTN4-211ENST00000589528 CACNG4Q9UBN1 327 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 ZMYM2Q9UBW7 1377 aa16.89■□□□□ 0.29
ACTN4-211ENST00000589528 CASTOR2A6NHX0 329 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 SPTLC1O15269 473 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 PRKCQQ04759 706 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 CSTF1Q05048 431 aaKnown RBP16.88■□□□□ 0.29
ACTN4-211ENST00000589528 ELAVL2Q12926 359 aaKnown RBP16.88■□□□□ 0.29
ACTN4-211ENST00000589528 TUSC3Q13454 348 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 AMHR2Q16671 573 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 RSPO4Q2I0M5 234 aaPredicted RBP16.88■□□□□ 0.29
ACTN4-211ENST00000589528 ZNF528Q3MIS6 628 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 SLC44A4Q53GD3 710 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 FAM171A1Q5VUB5 890 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 PDXDC1Q6P996 788 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 GSTCDQ8NEC7 633 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 FGF13Q92913 245 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 BORCS6Q96GS4 357 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 EIF2AK1Q9BQI3 630 aaKnown RBP16.88■□□□□ 0.29
ACTN4-211ENST00000589528 NFKBIZQ9BYH8 718 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 VWA8A3KMH1 1905 aa16.88■□□□□ 0.29
ACTN4-211ENST00000589528 A0A1B0GUA9 196 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 FAM170BA6NMN3 283 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 HOXA9P31269 272 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 MAGEA9P43362 315 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 VARS2Q5ST30 1063 aaKnown RBP16.87■□□□□ 0.29
ACTN4-211ENST00000589528 SUMF1Q8NBK3 374 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 SLC7A14Q8TBB6 771 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 PIK3R5Q8WYR1 880 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 KXD1Q9BQD3 176 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 CLSTN3Q9BQT9 956 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 PAAF1Q9BRP4 392 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 POLR3FQ9H1D9 316 aaPredicted RBP16.87■□□□□ 0.29
ACTN4-211ENST00000589528 ZSWIM6Q9HCJ5 1215 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 ANKEF1Q9NU02 776 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 PCDHA12Q9UN75 941 aa16.87■□□□□ 0.29
ACTN4-211ENST00000589528 CACNA1BQ00975 2339 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 TRIP11Q15643 1979 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 NCAM2O15394 837 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 USO1O60763 962 aaKnown RBP16.86■□□□□ 0.29
ACTN4-211ENST00000589528 SLITRK3O94933 977 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 KIF4AO95239 1232 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 THP07101 528 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 SDHBP21912 280 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 GLRA2P23416 452 aa16.86■□□□□ 0.29
ACTN4-211ENST00000589528 ARL2P36404 184 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms