RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 C5orf42Q9H799 3197 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 MEIS3P2A8K0S8 358 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 HNRNPDLO14979 420 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 TOM1L1O75674 476 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 RECQL4O94761 1208 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 THP07101 528 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 MCF2P10911 925 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 AKAP5P24588 427 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 DDIT3P35638 169 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SLC11A1P49279 550 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 MRE11P49959 708 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 NHLH1Q02575 133 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SMAD4Q13485 552 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 NOLC1Q14978 699 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SMAD2Q15796 467 aaKnown RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 DUSP6Q16828 381 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 FAM173BQ6P4H8 233 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SV2BQ7L1I2 683 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 RNF135Q8IUD6 432 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 MYCT1Q8N699 235 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 LINC00301Q8NCQ3 95 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 CASP10Q92851 521 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 ZFP42Q96MM3 310 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SLC38A7Q9NVC3 462 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 ANKFY1Q9P2R3 1169 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SEL1LQ9UBV2 794 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 DPP7Q9UHL4 492 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 BARX2Q9UMQ3 279 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 PRG3Q9Y2Y8 225 aaPredicted RBP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SF3B1O75533 1304 aaKnown RBP eCLIP12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 TECTAO75443 2155 aa12.86□□□□□ -0.35
PRKCSH-207ENST00000588269 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 NT5C1B-RDH14C9J2C7 533 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 CUTAO60888 179 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 GLP2RO95838 553 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 CTSAP10619 480 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 MAPTP10636 758 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 GAP43P17677 238 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 GRM5P41594 1212 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 LIG4P49917 911 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ZNF131P52739 623 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 NCKAP1LP55160 1127 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 AMPD3Q01432 767 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 GRIN1Q05586 938 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 DSC1Q08554 894 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ELAVL2Q12926 359 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ADAM15Q13444 863 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 TUSC3Q13454 348 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 MCM6Q14566 821 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 TPRNQ4KMQ1 711 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 KIAA1841Q6NSI8 718 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ZNF280BQ86YH2 543 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 TMEM161BQ8NDZ6 487 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 KCNN1Q92952 543 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 EPSTI1Q96J88 318 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 UROC1Q96N76 676 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ACO2Q99798 780 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 ZBP1Q9H171 429 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 MAGEF1Q9HAY2 307 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 MRPL17Q9NRX2 175 aaKnown RBP12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 BLOC1S4Q9NUP1 217 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 SNTG2Q9NY99 539 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 FAM13BQ9NYF5 915 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 CLEC1BQ9P126 229 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 GDAQ9Y2T3 454 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 IRAK3Q9Y616 596 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 MYH15Q9Y2K3 1946 aa12.85□□□□□ -0.35
PRKCSH-207ENST00000588269 NRP1O14786 923 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 PER2O15055 1255 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 CLDN3O15551 220 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 TRAK2O60296 914 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 BRD1O95696 1058 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 SOD2P04179 222 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 ME1P48163 572 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 ERVFC1P60507 584 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 CACNB1Q02641 598 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 ALCAMQ13740 583 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 SPECC1Q5M775 1068 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 FOXD4L5Q5VV16 416 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 PDXDC1Q6P996 788 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 STXBP4Q6ZWJ1 553 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 MRPL43Q8N983 215 aaKnown RBP12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 FOXD4L4Q8WXT5 416 aaPredicted RBP12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 HVCN1Q96D96 273 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 HERC2P3Q9BVR0 1158 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 CDT1Q9H211 546 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 RNF39Q9H2S5 420 aa12.84□□□□□ -0.35
PRKCSH-207ENST00000588269 TNMDQ9H2S6 317 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms