RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 SPTBN2O15020 2390 aa17.36■□□□□ 0.37
NCLN-203ENST00000587740 INPPL1O15357 1258 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 POMCP01189 267 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 DCNP07585 359 aaKnown RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 SRFP11831 508 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 RPA1P27694 616 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 YWHABP31946 246 aaKnown RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 FOXD4L6Q3SYB3 417 aaPredicted RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 KIAA0319Q5VV43 1072 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 KRT79Q5XKE5 535 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 PLA2G4FQ68DD2 849 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 FOXD4L3Q6VB84 417 aaPredicted RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 GPR152Q8TDT2 470 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 HERC2P3Q9BVR0 1158 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 WRAP73Q9P2S5 460 aaPredicted RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 STK39Q9UEW8 545 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 MTCL1Q9Y4B5 1905 aaKnown RBP17.35■□□□□ 0.37
NCLN-203ENST00000587740 EPG5Q9HCE0 2579 aa17.35■□□□□ 0.37
NCLN-203ENST00000587740 F8W810 466 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 MED24O75448 989 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 LYPLA2O95372 231 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 PAPLNO95428 1278 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 SPATA31D3P0C874 917 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 GLULP15104 373 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 MUTP22033 750 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 CCT6AP40227 531 aaKnown RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 NUCB2P80303 420 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 SLC39A14Q15043 492 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 STK38Q15208 465 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 PTPAQ15257 358 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 SPECC1Q5M775 1068 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 ATL3Q6DD88 541 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 SPATA31D4Q6ZUB0 917 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 CATSPER3Q86XQ3 398 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 COLGALT2Q8IYK4 626 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 DCLK2Q8N568 766 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 ZNF579Q8NAF0 562 aaKnown RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 ST13P5Q8NFI4 369 aaPredicted RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 SNX29Q8TEQ0 813 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 SMG7Q92540 1137 aaKnown RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 FAM193BQ96PV7 902 aaPredicted RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 RXFP1Q9HBX9 757 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 KANSL3Q9P2N6 904 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 PRG3Q9Y2Y8 225 aaPredicted RBP17.34■□□□□ 0.37
NCLN-203ENST00000587740 ATP6V1DQ9Y5K8 247 aa17.34■□□□□ 0.37
NCLN-203ENST00000587740 GLUD1P00367 558 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 URODP06132 367 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 ADH1AP07327 375 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 SP9P0CG40 484 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 SPATA31C1P0DKV0 1188 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 MARCKSP29966 332 aaPredicted RBP17.33■□□□□ 0.36
NCLN-203ENST00000587740 NASPP49321 788 aaPredicted RBP17.33■□□□□ 0.36
NCLN-203ENST00000587740 NPEPPSP55786 919 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 PHLDB3Q6NSJ2 640 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 CYP26C1Q6V0L0 522 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 DGLUCYQ7Z3D6 616 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 SMG8Q8ND04 991 aaKnown RBP17.33■□□□□ 0.36
NCLN-203ENST00000587740 CEP170P1Q96L14 293 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 AK8Q96MA6 479 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 NACC1Q96RE7 527 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 MIOSQ9NXC5 875 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 CFAP45Q9UL16 551 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 ZDHHC9Q9Y397 364 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
NCLN-203ENST00000587740 CNTNAP2Q9UHC6 1331 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 PP2D1A8MPX8 630 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 ANHXE9PGG2 379 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 XRCC6P12956 609 aaKnown RBP eCLIP17.32■□□□□ 0.36
NCLN-203ENST00000587740 LAMP2P13473 410 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 NCLP19338 710 aaKnown RBP17.32■□□□□ 0.36
NCLN-203ENST00000587740 CDC25AP30304 524 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 LONP1P36776 959 aaKnown RBP17.32■□□□□ 0.36
NCLN-203ENST00000587740 DSC1Q08554 894 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 XKR9Q5GH70 373 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 EXOC8Q8IYI6 725 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 STAMQ92783 540 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 NXPE3Q969Y0 559 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 CCDC43Q96MW1 224 aaKnown RBP17.32■□□□□ 0.36
NCLN-203ENST00000587740 NT5C3AQ9H0P0 336 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 RNF39Q9H2S5 420 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 ARHGEF3Q9NR81 526 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 ANKEF1Q9NU02 776 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 SIT1Q9Y3P8 196 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 PPME1Q9Y570 386 aa17.32■□□□□ 0.36
NCLN-203ENST00000587740 SRPRBQ9Y5M8 271 aaKnown RBP17.32■□□□□ 0.36
NCLN-203ENST00000587740 MORC2Q9Y6X9 1032 aaPredicted RBP17.32■□□□□ 0.36
NCLN-203ENST00000587740 MYH11P35749 1972 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 ZBTB39O15060 712 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 LRRN2O75325 713 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 YEATS4O95619 227 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 RFX1P22670 979 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 OR1G1P47890 313 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 GLUD2P49448 558 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 DSG1Q02413 1049 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 DNM1Q05193 864 aaKnown RBP17.31■□□□□ 0.36
NCLN-203ENST00000587740 HTR4Q13639 388 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 SRGAP1Q7Z6B7 1085 aa17.31■□□□□ 0.36
NCLN-203ENST00000587740 PALB2Q86YC2 1186 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms