RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PRIMPOLQ96LW4 560 aa15.58■□□□□ 0.08
DNMT1-213ENST00000587604 MTMR9Q96QG7 549 aa15.58■□□□□ 0.08
DNMT1-213ENST00000587604 POLR3FQ9H1D9 316 aaPredicted RBP15.58■□□□□ 0.08
DNMT1-213ENST00000587604 DCHS1Q96JQ0 3298 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 A0A087WWV3 80 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 BTBD18B2RXH4 712 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 ANHXE9PGG2 379 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 NEMFO60524 1076 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 ZMYND10O75800 440 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
DNMT1-213ENST00000587604 RFX1P22670 979 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 HSP90AA2PQ14568 343 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-213ENST00000587604 POTEGQ6S5H5 508 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 PPP4R3CPQ6ZMV5 832 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 RABGGTAQ92696 567 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 FZD8Q9H461 694 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 PRMT7Q9NVM4 692 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-213ENST00000587604 CA14Q9ULX7 337 aa15.57■□□□□ 0.08
DNMT1-213ENST00000587604 ZFP37Q9Y6Q3 630 aaPredicted RBP15.57■□□□□ 0.08
DNMT1-213ENST00000587604 SF3B1O75533 1304 aaKnown RBP eCLIP15.57■□□□□ 0.08
DNMT1-213ENST00000587604 LRRIQ4A6NIV6 560 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 USO1O60763 962 aaKnown RBP15.56■□□□□ 0.08
DNMT1-213ENST00000587604 ANAPC15P60006 121 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 TUSC3Q13454 348 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 FAM187BQ17R55 369 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 RTP2Q5QGT7 225 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 PHLDB3Q6NSJ2 640 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 GET4Q7L5D6 327 aaPredicted RBP15.56■□□□□ 0.08
DNMT1-213ENST00000587604 MAEAQ7L5Y9 396 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 MCPH1Q8NEM0 835 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 GPR152Q8TDT2 470 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 PAAF1Q9BRP4 392 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 SEMA4AQ9H3S1 761 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 TBC1D17Q9HA65 648 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 GPRC5CQ9NQ84 441 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 SLC2A4RGQ9NR83 387 aa15.56■□□□□ 0.08
DNMT1-213ENST00000587604 SPATA31C1P0DKV0 1188 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 FSHRP23945 695 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 HTR4Q13639 388 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 ME3Q16798 604 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 CDCA2Q69YH5 1023 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-213ENST00000587604 PRSS55Q6UWB4 352 aaPredicted RBP15.55■□□□□ 0.08
DNMT1-213ENST00000587604 ZBTB8OSQ8IWT0 167 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 DIS3L2Q8IYB7 885 aaKnown RBP15.55■□□□□ 0.08
DNMT1-213ENST00000587604 NECAB1Q8N987 351 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 CLSTN3Q9BQT9 956 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 TUFT1Q9NNX1 390 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 CACNG4Q9UBN1 327 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 FBXW11Q9UKB1 542 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 OTOGLQ3ZCN5 2332 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 TRIP11Q15643 1979 aa15.55■□□□□ 0.08
DNMT1-213ENST00000587604 CACNA1AO00555 2505 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 POTEMA6NI47 508 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 WNT7AO00755 349 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 THP07101 528 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 HNRNPA1P09651 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
DNMT1-213ENST00000587604 ATP2B1P20020 1258 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 FAM171A1Q5VUB5 890 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 CATSPER3Q86XQ3 398 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 CEP57Q86XR8 500 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 NSUN7Q8NE18 718 aaKnown RBP15.54■□□□□ 0.08
DNMT1-213ENST00000587604 LNX1Q8TBB1 728 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-213ENST00000587604 PIK3R5Q8WYR1 880 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 GTF3C6Q969F1 213 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 NACC1Q96RE7 527 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 C2orf40Q9H1Z8 148 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 ARHGEF3Q9NR81 526 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 SNTG2Q9NY99 539 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 DAXXQ9UER7 740 aaPredicted RBP15.54■□□□□ 0.08
DNMT1-213ENST00000587604 SIT1Q9Y3P8 196 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 NUMBLQ9Y6R0 609 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 FANCMQ8IYD8 2048 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 VWA8A3KMH1 1905 aa15.54■□□□□ 0.08
DNMT1-213ENST00000587604 MYH15Q9Y2K3 1946 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 CASTOR2A6NHX0 329 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 TTLL13PA6NNM8 815 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 PTGESO14684 152 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 N4BP3O15049 544 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 KIF4AO95239 1232 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 ELAVL2Q12926 359 aaKnown RBP15.53■□□□□ 0.08
DNMT1-213ENST00000587604 PRPF4BQ13523 1007 aaKnown RBP15.53■□□□□ 0.08
DNMT1-213ENST00000587604 TRIM29Q14134 588 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 MAPK6Q16659 721 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 LIN9Q5TKA1 542 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 PDXDC1Q6P996 788 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 DCLRE1AQ6PJP8 1040 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 ERMP1Q7Z2K6 904 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 GRASPQ7Z6J2 395 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-213ENST00000587604 HASPINQ8TF76 798 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 POLR3CQ9BUI4 534 aaPredicted RBP15.53■□□□□ 0.08
DNMT1-213ENST00000587604 TMEM60Q9H2L4 133 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 PDZD7Q9H5P4 517 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 DLGAP2Q9P1A6 1054 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 CDH7Q9ULB5 785 aa15.53■□□□□ 0.08
DNMT1-213ENST00000587604 ACKR2O00590 384 aa15.52■□□□□ 0.08
DNMT1-213ENST00000587604 MED24O75448 989 aa15.52■□□□□ 0.08
DNMT1-213ENST00000587604 RECQL4O94761 1208 aa15.52■□□□□ 0.08
DNMT1-213ENST00000587604 LARGE1O95461 756 aa15.52■□□□□ 0.08
DNMT1-213ENST00000587604 LMNAP02545 664 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms