RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 ENPEPQ07075 957 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 MAN2A1Q16706 1144 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 TCTN1Q2MV58 587 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 FILIP1LQ4L180 1135 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 PLEKHG4Q58EX7 1191 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 CEP135Q66GS9 1140 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 MFSD5Q6N075 450 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 SLC27A1Q6PCB7 646 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.25■□□□□ 0.19
NFIX-208ENST00000587260 TMEM199Q8N511 208 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 CEP120Q8N960 986 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 DBF4BQ8NFT6 615 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 SEPT8Q92599 483 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 TRIM6Q9C030 488 aaPredicted RBP16.25■□□□□ 0.19
NFIX-208ENST00000587260 KIAA1586Q9HCI6 787 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
NFIX-208ENST00000587260 RALGAPA2Q2PPJ7 1873 aa16.25■□□□□ 0.19
NFIX-208ENST00000587260 TULP1O00294 542 aaPredicted RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 PARNO95453 639 aaKnown RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 CXCL10P02778 98 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 PRKCSHP14314 528 aaPredicted RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 ZSCAN20P17040 1043 aaPredicted RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 MTIF2P46199 727 aaKnown RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 MCL1Q07820 350 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 MIIPQ5JXC2 388 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 ZBTB41Q5SVQ8 909 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 UBXN11Q5T124 520 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 FAM186BQ8IYM0 893 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 THNSL1Q8IYQ7 743 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 BADQ92934 168 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 FAM213AQ9BRX8 229 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 INTS13Q9NVM9 706 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 TAB2Q9NYJ8 693 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 AGO2Q9UKV8 859 aaKnown RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 ANK1P16157 1881 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 LGALS16A8MUM7 142 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 LDHAP00338 332 aaKnown RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 TPM2P07951 284 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 MCF2P10911 925 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 RFC2P35250 354 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 ACOT2P49753 483 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 CCDC173Q0VFZ6 552 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 DCAF4L1Q3SXM0 396 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 VWA3BQ502W6 1294 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 CREBRFQ8IUR6 639 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 GPD1LQ8N335 351 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 RDH13Q8NBN7 331 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 LINC01599Q8WXQ3 324 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 CCDC51Q96ER9 411 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 PPP1R9BQ96SB3 815 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 ADAM2Q99965 735 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 APOL6Q9BWW8 343 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 VPS16Q9H269 839 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 NXF3Q9H4D5 531 aaKnown RBP16.24■□□□□ 0.19
NFIX-208ENST00000587260 CHST12Q9NRB3 414 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 HES2Q9Y543 173 aa16.24■□□□□ 0.19
NFIX-208ENST00000587260 CITO14578 2027 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 EXTL3O43909 919 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 ACRP10323 421 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 TNFSF9P41273 254 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 DSC3Q14574 896 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 INTS8Q75QN2 995 aaKnown RBP16.23■□□□□ 0.19
NFIX-208ENST00000587260 CBWD2Q8IUF1 395 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 TMEM192Q8IY95 271 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 MFSD14AQ96MC6 490 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 NDST4Q9H3R1 872 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 FAM105AQ9NUU6 356 aa16.23■□□□□ 0.19
NFIX-208ENST00000587260 OGTO15294 1046 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 FAM189A1O60320 539 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 PBX1P40424 430 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 POU5F1Q01860 360 aaKnown RBP16.22■□□□□ 0.19
NFIX-208ENST00000587260 FPGSQ05932 587 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 SNRNP35Q16560 246 aaKnown RBP16.22■□□□□ 0.19
NFIX-208ENST00000587260 CNKSR3Q6P9H4 555 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 APBB1IPQ7Z5R6 666 aaPredicted RBP16.22■□□□□ 0.19
NFIX-208ENST00000587260 APBB2Q92870 758 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 SLC35C1Q96A29 364 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 VWCEQ96DN2 955 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 FTHL17Q9BXU8 183 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 IPPQ9Y573 584 aa16.22■□□□□ 0.19
NFIX-208ENST00000587260 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.22■□□□□ 0.19
NFIX-208ENST00000587260 TEX33O43247 280 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 ADRB2P07550 413 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 BFSP1Q12934 665 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 CRELD2Q6UXH1 353 aaPredicted RBP16.21■□□□□ 0.19
NFIX-208ENST00000587260 RNF169Q8NCN4 708 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 TMC2Q8TDI7 906 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 PCDHB2Q9Y5E7 798 aa16.21■□□□□ 0.19
NFIX-208ENST00000587260 PDCD11Q14690 1871 aaKnown RBP16.21■□□□□ 0.19
NFIX-208ENST00000587260 A0A1W2PQC6 194 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 ZNF233A6NK53 670 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 STAG3L1P0CL83 205 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 CXCL8P10145 99 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 MLLT1Q03111 559 aaPredicted RBP16.2■□□□□ 0.18
NFIX-208ENST00000587260 PTPRSQ13332 1948 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 PPIGQ13427 754 aaKnown RBP eCLIP16.2■□□□□ 0.181e-7■■□□□ 12.9
NFIX-208ENST00000587260 TRIP11Q15643 1979 aa16.2■□□□□ 0.18
NFIX-208ENST00000587260 RTN4RL1Q86UN2 441 aaPredicted RBP16.2■□□□□ 0.18
NFIX-208ENST00000587260 VSTM4Q8IW00 320 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms