RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 ARHGEF3Q9NR81 526 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 SLC2A4RGQ9NR83 387 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 ANKEF1Q9NU02 776 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 PARP2Q9UGN5 583 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 SIT1Q9Y3P8 196 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 STK36Q9NRP7 1315 aa18.13■□□□□ 0.49
NPC1-205ENST00000587163 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
NPC1-205ENST00000587163 DGAT1O75907 488 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 CDKL5O76039 1030 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 GLULP15104 373 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 XBP1P17861 261 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 RARRES1P49788 294 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 NTHL1P78549 312 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 GRIK3Q13003 919 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 DCLRE1AQ6PJP8 1040 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 GRASPQ7Z6J2 395 aaPredicted RBP18.12■□□□□ 0.49
NPC1-205ENST00000587163 HACE1Q8IYU2 909 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 PIGOQ8TEQ8 1089 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 HASPINQ8TF76 798 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 CLSTN3Q9BQT9 956 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 FOXQ1Q9C009 403 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 CXCL16Q9H2A7 254 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 SEMA4AQ9H3S1 761 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 PCDHA12Q9UN75 941 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 DMXL1Q9Y485 3027 aa18.12■□□□□ 0.49
NPC1-205ENST00000587163 POTEMA6NI47 508 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 TTLL13PA6NNM8 815 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 WNT7AO00755 349 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 PFKFB2O60825 505 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 LRRN2O75325 713 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 SP9P0CG40 484 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 FSHRP23945 695 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 GPC5P78333 572 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 HSP90AA2PQ14568 343 aaPredicted RBP18.11■□□□□ 0.49
NPC1-205ENST00000587163 PARM1Q6UWI2 310 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 FGF14Q92915 247 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 RMDN1Q96DB5 314 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 POLR3FQ9H1D9 316 aaPredicted RBP18.11■□□□□ 0.49
NPC1-205ENST00000587163 TTC12Q9H892 705 aaPredicted RBP18.11■□□□□ 0.49
NPC1-205ENST00000587163 GPRC5CQ9NQ84 441 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 FBXW11Q9UKB1 542 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 COL4A3Q01955 1670 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 FRYLO94915 3013 aa18.11■□□□□ 0.49
NPC1-205ENST00000587163 CACNA1AO00555 2505 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 CASTOR2A6NHX0 329 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 ADAM12O43184 909 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 FDPSP14324 419 aaKnown RBP18.1■□□□□ 0.49
NPC1-205ENST00000587163 CREMQ03060 361 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 MAEAQ7L5Y9 396 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 C1orf210Q8IVY1 113 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 KIAA2013Q8IYS2 634 aa18.1■□□□□ 0.49
NPC1-205ENST00000587163 LNX1Q8TBB1 728 aaPredicted RBP18.1■□□□□ 0.49
NPC1-205ENST00000587163 ORC3Q9UBD5 711 aaPredicted RBP18.1■□□□□ 0.49
NPC1-205ENST00000587163 SF3B1O75533 1304 aaKnown RBP eCLIP18.09■□□□□ 0.49
NPC1-205ENST00000587163 PTGESO14684 152 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 USO1O60763 962 aaKnown RBP18.09■□□□□ 0.49
NPC1-205ENST00000587163 KIF4AO95239 1232 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 KRT2P35908 639 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 TXKP42681 527 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 STARD6P59095 220 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 TUSC3Q13454 348 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 CALCRLQ16602 461 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 FAM171A1Q5VUB5 890 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 CEP57Q86XR8 500 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 MAML2Q8IZL2 1156 aaPredicted RBP18.09■□□□□ 0.49
NPC1-205ENST00000587163 PJA1Q8NG27 643 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 TTPALQ9BTX7 342 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 CDH7Q9ULB5 785 aa18.09■□□□□ 0.49
NPC1-205ENST00000587163 ZMYM2Q9UBW7 1377 aa18.08■□□□□ 0.49
NPC1-205ENST00000587163 LRRIQ4A6NIV6 560 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 IGFBP6P24592 240 aaPredicted RBP18.08■□□□□ 0.48
NPC1-205ENST00000587163 SNW1Q13573 536 aaKnown RBP18.08■□□□□ 0.48
NPC1-205ENST00000587163 NAB2Q15742 525 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 PIK3R5Q8WYR1 880 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 CCDC43Q96MW1 224 aaKnown RBP18.08■□□□□ 0.48
NPC1-205ENST00000587163 FZD8Q9H461 694 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 SNTG2Q9NY99 539 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 USP20Q9Y2K6 914 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 ZFP37Q9Y6Q3 630 aaPredicted RBP18.08■□□□□ 0.48
NPC1-205ENST00000587163 CACNA1IQ9P0X4 2223 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 MYH15Q9Y2K3 1946 aa18.08■□□□□ 0.48
NPC1-205ENST00000587163 DNAH14Q0VDD8 3507 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 FANCMQ8IYD8 2048 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 CCL16O15467 120 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 C8AP07357 584 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 SPATA31C1P0DKV0 1188 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 PSMD5Q16401 504 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 PPM1LQ5SGD2 360 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 DCLK2Q8N568 766 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 ITFG1Q8TB96 612 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 FGF13Q92913 245 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 MTMR9Q96QG7 549 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 PDZD7Q9H5P4 517 aa18.07■□□□□ 0.48
NPC1-205ENST00000587163 PRMT7Q9NVM4 692 aaPredicted RBP18.07■□□□□ 0.48
NPC1-205ENST00000587163 MTF2Q9Y483 593 aaPredicted RBP18.07■□□□□ 0.48
NPC1-205ENST00000587163 MED19A0JLT2 244 aaPredicted RBP18.06■□□□□ 0.48
NPC1-205ENST00000587163 BTBD18B2RXH4 712 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms