RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 C1orf112Q9NSG2 853 aa15.32■□□□□ 0.04
LIG3-205ENST00000585941 BUB1O43683 1085 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 LRRN2O75325 713 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 C22orf31O95567 290 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 TMEM253P0C7T8 217 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 TMOD1P28289 359 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 ADCYAP1R1P41586 468 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 ACOT2P49753 483 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 ZNF157P51786 506 aaPredicted RBP15.31■□□□□ 0.04
LIG3-205ENST00000585941 ITIH3Q06033 890 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 PRPF4BQ13523 1007 aaKnown RBP15.31■□□□□ 0.04
LIG3-205ENST00000585941 WDR44Q5JSH3 913 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 RHPN2Q8IUC4 686 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 CAGE1Q8TC20 777 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 HELQQ8TDG4 1101 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 AFG1LQ8WV93 481 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 UBE2Q2Q8WVN8 375 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 PACSIN1Q9BY11 444 aa15.31■□□□□ 0.04
LIG3-205ENST00000585941 TOPORSQ9NS56 1045 aaPredicted RBP15.31■□□□□ 0.04
LIG3-205ENST00000585941 KAT6AQ92794 2004 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 NCANO14594 1321 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 ACKR2O00590 384 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 OGTO15294 1046 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 PALMO75781 387 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 C4BPAP04003 597 aaKnown RBP15.3■□□□□ 0.04
LIG3-205ENST00000585941 INSRRP14616 1297 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 PHKA2P46019 1235 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 PTENP60484 403 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 MCL1Q07820 350 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 TMEM63BQ5T3F8 832 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 FBXO38Q6PIJ6 1188 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 TSHZ1Q6ZSZ6 1077 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 ZNF572Q7Z3I7 529 aaPredicted RBP15.3■□□□□ 0.04
LIG3-205ENST00000585941 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 SYCE1Q8N0S2 351 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 METTL13Q8N6R0 699 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 CTNNBL1Q8WYA6 563 aaPredicted RBP15.3■□□□□ 0.04
LIG3-205ENST00000585941 DHX38Q92620 1227 aaKnown RBP15.3■□□□□ 0.04
LIG3-205ENST00000585941 ZBTB45Q96K62 511 aaPredicted RBP15.3■□□□□ 0.04
LIG3-205ENST00000585941 KREMEN1Q96MU8 473 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 OSBPL9Q96SU4 736 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 TCHPQ9BT92 498 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 HAPLN2Q9GZV7 340 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 FZD8Q9H461 694 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 RNPEPQ9H4A4 650 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 NMRK2Q9NPI5 230 aa15.3■□□□□ 0.04
LIG3-205ENST00000585941 ANKRD62A6NC57 917 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 CES2O00748 559 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 GZMAP12544 262 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
LIG3-205ENST00000585941 GALCP54803 685 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 MAP2K5Q13163 448 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 DGKDQ16760 1214 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 MORN1Q5T089 497 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 MEI1Q5TIA1 1274 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 MPZL3Q6UWV2 235 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 IFNLR1Q8IU57 520 aaPredicted RBP15.29■□□□□ 0.04
LIG3-205ENST00000585941 OLIG1Q8TAK6 271 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 RFFLQ8WZ73 363 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 ZNF516Q92618 1163 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 TLR10Q9BXR5 811 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 PDE11AQ9HCR9 933 aa15.29■□□□□ 0.04
LIG3-205ENST00000585941 PRMT7Q9NVM4 692 aaPredicted RBP15.29■□□□□ 0.04
LIG3-205ENST00000585941 H3BRB1 525 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 HLA-DRAP01903 254 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 HOXC6P09630 235 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 PROZP22891 400 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 USP8P40818 1118 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 PIK3CAP42336 1068 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 PAFAH1B1P43034 410 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 BPIFB4P59827 614 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 POU5F1Q01860 360 aaKnown RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 BIRC3Q13489 604 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 TAF1CQ15572 869 aaPredicted RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 FAM187BQ17R55 369 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 RGMBQ6NW40 437 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 WDR49Q8IV35 697 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 LINC01465Q8N7H1 131 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 MSANTD4Q8NCY6 345 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 OR6J1Q8NGC5 347 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 EPS8L1Q8TE68 723 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 TRAPPC12Q8WVT3 735 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 TUT1Q9H6E5 874 aaKnown RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 SEPT11Q9NVA2 429 aaKnown RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 CNTNAP2Q9UHC6 1331 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 GRID2IPA4D2P6 1211 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 INO80B-WBP1J3KQ70 363 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 SRGAP2O75044 1071 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 RTN2O75298 545 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 EDN1P05305 212 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 SMPD1P17405 629 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 TBXAS1P24557 533 aaPredicted RBP15.28■□□□□ 0.04
LIG3-205ENST00000585941 MCM3P25205 808 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 PDE6CP51160 858 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 CLCN3P51790 818 aa15.28■□□□□ 0.04
LIG3-205ENST00000585941 BRD3Q15059 726 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms