RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 KIAA1586Q9HCI6 787 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 SAMSN1Q9NSI8 373 aaKnown RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 PRMT7Q9NVM4 692 aaPredicted RBP13.79□□□□□ -0.2
VMP1-202ENST00000585847 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
VMP1-202ENST00000585847 K7ERI5 159 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 ENPP3O14638 875 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 PIGRP01833 764 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 PFKMP08237 780 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 EPB41P11171 864 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 ATP1A3P13637 1013 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 PROZP22891 400 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 SFPQP23246 707 aaKnown RBP eCLIP13.78□□□□□ -0.2
VMP1-202ENST00000585847 NR2F2P24468 414 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 STRN3Q13033 797 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 MAPK6Q16659 721 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 MAN2A1Q16706 1144 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 SPECC1LQ69YQ0 1117 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.78□□□□□ -0.23e-6■■■■□ 19.8
VMP1-202ENST00000585847 FAM43BQ6ZT52 329 aaPredicted RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 CDR2LQ86X02 465 aaPredicted RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 DRC7Q8IY82 874 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 SYCP3Q8IZU3 236 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 CRIPAKQ8N1N5 446 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 HERVK_113Q902F9 699 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 APBB2Q92870 758 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 CNOT6LQ96LI5 555 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 PRIMPOLQ96LW4 560 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 ACO2Q99798 780 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 TARS2Q9BW92 718 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 XPO4Q9C0E2 1151 aaKnown RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 PTPRHQ9HD43 1115 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 CXXC1Q9P0U4 656 aaPredicted RBP13.78□□□□□ -0.2
VMP1-202ENST00000585847 FRMD4BQ9Y2L6 1034 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.78□□□□□ -0.2
VMP1-202ENST00000585847 CNTNAP2Q9UHC6 1331 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 ZMYM2Q9UBW7 1377 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 COL4A6Q14031 1691 aa13.78□□□□□ -0.2
VMP1-202ENST00000585847 A0A1B0GUA9 196 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 TISP43B9A030 160 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 C9IYK1 514 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 N4BP3O15049 544 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 FGBP02675 491 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 NR3C1P04150 777 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 GARTP22102 1010 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 KCNA4P22459 653 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 MTIF2P46199 727 aaKnown RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 COPB1P53618 953 aaKnown RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 ADAM9Q13443 819 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 NR1I3Q14994 352 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 KRT31Q15323 416 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 TRIP11Q15643 1979 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 SLFN12LQ6IEE8 588 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 OTOP2Q7RTS6 562 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 APTXQ7Z2E3 356 aaKnown RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 FMNL3Q8IVF7 1028 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 CCDC51Q96ER9 411 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 ZBTB45Q96K62 511 aaPredicted RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 TUBGCP2Q9BSJ2 902 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 NUP58Q9BVL2 599 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 TSPYL2Q9H2G4 693 aaPredicted RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 PDZD7Q9H5P4 517 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
VMP1-202ENST00000585847 AGPAT3Q9NRZ7 376 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 RGS18Q9NS28 235 aa13.77□□□□□ -0.21
VMP1-202ENST00000585847 EYSQ5T1H1 3165 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 ABHD14A-ACY1A0A1B0GW23 586 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 TRIM49BA6NDI0 452 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 ANKRD63C9JTQ0 380 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 STX10O60499 249 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 ATF7P17544 494 aaPredicted RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 AXLP30530 894 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 PSMC2P35998 433 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 PMS1P54277 932 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 WDR5P61964 334 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 FAM189BP81408 668 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 DEFB103AP81534 67 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 POU5F1Q01860 360 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 PRPF4BQ13523 1007 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 FIGNQ5HY92 759 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 PSRC1Q6PGN9 363 aaPredicted RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 ZPBP2Q6X784 338 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 INTS8Q75QN2 995 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 ADAM2Q99965 735 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 TRAIPQ9BWF2 469 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 EIF2AQ9BY44 585 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 EDEM3Q9BZQ6 932 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 TTYH1Q9H313 450 aaPredicted RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 CHST12Q9NRB3 414 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 ARMCX3Q9UH62 379 aaPredicted RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 PIN4Q9Y237 131 aaKnown RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 TNFSF13BQ9Y275 285 aa13.76□□□□□ -0.21
VMP1-202ENST00000585847 FNDC1Q4ZHG4 1894 aaPredicted RBP13.76□□□□□ -0.21
VMP1-202ENST00000585847 GBF1Q92538 1859 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms