RNA–Protein interactions for RNA: ENST00000584878.1

NLK-206, Transcript of nemo like kinase, humanhuman

TSL 1 (best)

Gene NLK, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-206ENST00000584878 UHRF1Q96T88 793 aaPredicted RBP6.19□□□□□ -1.42
NLK-206ENST00000584878 FZD1Q9UP38 647 aa6.19□□□□□ -1.42
NLK-206ENST00000584878 CHST2Q9Y4C5 530 aa6.19□□□□□ -1.42
NLK-206ENST00000584878 CXorf49A8MYA2 514 aaPredicted RBP6.18□□□□□ -1.42
NLK-206ENST00000584878 PHF2O75151 1096 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 ITGB1P05556 798 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 MTHFD2P13995 350 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 ECHS1P30084 290 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 FLT3LGP49771 235 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 NOMO1Q15155 1222 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 BMT2Q1RMZ1 405 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 MUM1L1Q5H9M0 696 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 KCNV1Q6PIU1 500 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 PDZD4Q76G19 769 aaPredicted RBP6.18□□□□□ -1.42
NLK-206ENST00000584878 ULK2Q8IYT8 1036 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 OR7D4Q8NG98 312 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 FATE1Q969F0 183 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 PAWRQ96IZ0 340 aaKnown RBP6.18□□□□□ -1.42
NLK-206ENST00000584878 PHACTR3Q96KR7 559 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 NEU1Q99519 415 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 GREM2Q9H772 168 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 PRKAB1Q9Y478 270 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 PCDHGA2Q9Y5H1 932 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 WDR33Q9C0J8 1336 aaKnown RBP6.18□□□□□ -1.42
NLK-206ENST00000584878 ATRNL1Q5VV63 1379 aa6.18□□□□□ -1.42
NLK-206ENST00000584878 CENPVL1A0A0U1RR11 272 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 ABHD16AO95870 558 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 ALOX15P16050 662 aaPredicted RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 ZSCAN20P17040 1043 aaPredicted RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 SREBF1P36956 1147 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 MTNR1BP49286 362 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 CHN2P52757 468 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 RAP2BP61225 183 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 TIGD2Q4W5G0 525 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 PDCD4Q53EL6 469 aaKnown RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 RNF219Q5W0B1 726 aaPredicted RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 PCSK4Q6UW60 755 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 ZNF572Q7Z3I7 529 aaPredicted RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 MRGPRGQ86SM5 289 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 DDX42Q86XP3 938 aaKnown RBP eCLIP6.17□□□□□ -1.42
NLK-206ENST00000584878 PQLC1Q8N2U9 271 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 HOXB13Q92826 284 aaPredicted RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 AGAP2Q99490 1192 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 BCO1Q9HAY6 547 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 AKIP1Q9NQ31 210 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 RBM12Q9NTZ6 932 aaKnown RBP6.17□□□□□ -1.42
NLK-206ENST00000584878 ANKFY1Q9P2R3 1169 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 HS3ST4Q9Y661 456 aa6.17□□□□□ -1.42
NLK-206ENST00000584878 RAMP2O60895 175 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 RAP2AP10114 183 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 LAG3P18627 525 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 FPR1P21462 350 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 MCAMP43121 646 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 PER3P56645 1201 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 MALLQ13021 153 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 SEPT2Q15019 361 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 FAM47AQ5JRC9 791 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 MBNL2Q5VZF2 373 aaKnown RBP6.16□□□□□ -1.42
NLK-206ENST00000584878 AFMIDQ63HM1 303 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 DRICH1Q6PGQ1 229 aaPredicted RBP6.16□□□□□ -1.42
NLK-206ENST00000584878 OR2I1PQ8NGU4 316 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 ADI1Q9BV57 179 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 DNM3Q9UQ16 869 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 CLCA2Q9UQC9 943 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 MAP3K2Q9Y2U5 619 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 USP15Q9Y4E8 981 aaPredicted RBP6.16□□□□□ -1.42
NLK-206ENST00000584878 DMRT1Q9Y5R6 373 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 WASHC2AQ641Q2 1341 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 PNPLA7Q6ZV29 1317 aa6.16□□□□□ -1.42
NLK-206ENST00000584878 FOXN1O15353 648 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 NDUFA10O95299 355 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 GSPT1P15170 499 aaKnown RBP6.15□□□□□ -1.42
NLK-206ENST00000584878 CLRN1P58418 232 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 LY6G5CQ5SRR4 150 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 ATXN7L2Q5T6C5 722 aaPredicted RBP6.15□□□□□ -1.42
NLK-206ENST00000584878 METRNLQ641Q3 311 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 LAIR1Q6GTX8 287 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 CNTD1Q8N815 330 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 PPM1NQ8N819 430 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 DCLRE1CQ96SD1 692 aaKnown RBP6.15□□□□□ -1.42
NLK-206ENST00000584878 SENP6Q9GZR1 1112 aaPredicted RBP6.15□□□□□ -1.42
NLK-206ENST00000584878 AJAP1Q9UKB5 411 aaPredicted RBP6.15□□□□□ -1.42
NLK-206ENST00000584878 ZBTB21Q9ULJ3 1066 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 SIK3Q9Y2K2 1263 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 GPR45Q9Y5Y3 372 aa6.15□□□□□ -1.42
NLK-206ENST00000584878 PHLDB1Q86UU1 1377 aa6.15□□□□□ -1.43
NLK-206ENST00000584878 UNC119BA6NIH7 251 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 RNASET2O00584 256 aaKnown RBP6.14□□□□□ -1.43
NLK-206ENST00000584878 RBP3P10745 1247 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 IARSP41252 1262 aaKnown RBP6.14□□□□□ -1.43
NLK-206ENST00000584878 ALDH1A3P47895 512 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 SLC6A9P48067 706 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 SLC5A3P53794 718 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 FAPQ12884 760 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 KLF1Q13351 362 aaPredicted RBP6.14□□□□□ -1.43
NLK-206ENST00000584878 PTPAQ15257 358 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 CLUL1Q15846 466 aa6.14□□□□□ -1.43
NLK-206ENST00000584878 FAM102AQ5T9C2 384 aaPredicted RBP6.14□□□□□ -1.43
NLK-206ENST00000584878 ZFP28Q8NHY6 868 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms