RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 DHX40Q8IX18 779 aaKnown RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 FAM186BQ8IYM0 893 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 RDH13Q8NBN7 331 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 FBXL18Q96ME1 805 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 ACAP3Q96P50 834 aa19.94■□□□□ 0.78
RFFL-211ENST00000584541 RPF1Q9H9Y2 349 aaKnown RBP19.94■□□□□ 0.78
RFFL-211ENST00000584541 ANK1P16157 1881 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 C9IYK1 514 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 MAPK13O15264 365 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 ZNF623O75123 536 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 BAIAP3O94812 1187 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 FGBP02675 491 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 STAG3L1P0CL83 205 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 ITGA4P13612 1032 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 IBSPP21815 317 aaPredicted RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 POU5F1Q01860 360 aaKnown RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 SEZ6Q53EL9 994 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 RTN4RL1Q86UN2 441 aaPredicted RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 LUZP1Q86V48 1076 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 ECHDC2Q86YB7 292 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 CEP120Q8N960 986 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 LINC01599Q8WXQ3 324 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 EEF2KMTQ96G04 330 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 APOL6Q9BWW8 343 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 NXF3Q9H4D5 531 aaKnown RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 METTL14Q9HCE5 456 aaKnown RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 TOPORSQ9NS56 1045 aaPredicted RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 SNTG2Q9NY99 539 aa19.93■□□□□ 0.78
RFFL-211ENST00000584541 CPSF3Q9UKF6 684 aaKnown RBP19.93■□□□□ 0.78
RFFL-211ENST00000584541 FAM189A1O60320 539 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 AKAP3O75969 853 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 EOMESO95936 686 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 KRT13P13646 458 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 CASP4P49662 377 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 NCAPHQ15003 741 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 TCTN1Q2MV58 587 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 MRPL10Q7Z7H8 261 aaKnown RBP19.92■□□□□ 0.78
RFFL-211ENST00000584541 USP37Q86T82 979 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 CBWD2Q8IUF1 395 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 CREBRFQ8IUR6 639 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 RNF169Q8NCN4 708 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 SMG8Q8ND04 991 aaKnown RBP19.92■□□□□ 0.78
RFFL-211ENST00000584541 RNF214Q8ND24 703 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 VWCEQ96DN2 955 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 UBN1Q9NPG3 1134 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 FANCLQ9NW38 375 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 RBAKQ9NYW8 714 aaPredicted RBP19.92■□□□□ 0.78
RFFL-211ENST00000584541 PARP2Q9UGN5 583 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 LRFN2Q9ULH4 789 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 HES2Q9Y543 173 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 TRIP11Q15643 1979 aa19.92■□□□□ 0.78
RFFL-211ENST00000584541 TULP1O00294 542 aaPredicted RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 AMHP03971 560 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 TNFSF9P41273 254 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 KCNJ6P48051 423 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 FAM189BP81408 668 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 SURF1Q15526 300 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 ZBTB41Q5SVQ8 909 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 CRELD2Q6UXH1 353 aaPredicted RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 ZNF365Q70YC5 407 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 INTS8Q75QN2 995 aaKnown RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 FRMD5Q7Z6J6 570 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 BRSK2Q8IWQ3 736 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 ZSWIM2Q8NEG5 633 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 ANKRD20A12PQ8NF67 263 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 MTIF3Q9H2K0 278 aaKnown RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 ELAC1Q9H777 363 aaKnown RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 SAMSN1Q9NSI8 373 aaKnown RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 ARMCX3Q9UH62 379 aaPredicted RBP19.91■□□□□ 0.78
RFFL-211ENST00000584541 PCDHB7Q9Y5E2 793 aa19.91■□□□□ 0.78
RFFL-211ENST00000584541 PDCD11Q14690 1871 aaKnown RBP19.9■□□□□ 0.78
RFFL-211ENST00000584541 TTC3P53804 2025 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.9■□□□□ 0.78
RFFL-211ENST00000584541 RBAK-RBAKDNI3L0D1 243 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 RECQL4O94761 1208 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 IL18RAPO95256 599 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 CDK11BP21127 795 aaKnown RBP19.9■□□□□ 0.78
RFFL-211ENST00000584541 PPP2R3AQ06190 1150 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 SPAG1Q07617 926 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 CYP24A1Q07973 514 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 OTOP2Q7RTS6 562 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 CD302Q8IX05 232 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 FAM212AQ96EL1 285 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 CNOT6LQ96LI5 555 aaKnown RBP19.9■□□□□ 0.78
RFFL-211ENST00000584541 MFSD14AQ96MC6 490 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 PLEKHA5Q9HAU0 1116 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 TMEM161AQ9NX61 479 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 GIT1Q9Y2X7 761 aa19.9■□□□□ 0.78
RFFL-211ENST00000584541 TNRC18O15417 2968 aaPredicted RBP19.89■□□□□ 0.78
RFFL-211ENST00000584541 ZBBXA8MT70 800 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 TDRD15B5MCY1 1934 aaKnown RBP19.89■□□□□ 0.77
RFFL-211ENST00000584541 KCNJ18B7U540 433 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 ADRB2P07550 413 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 CXCL8P10145 99 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 AKAP5P24588 427 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 EEF1GP26641 437 aaKnown RBP19.89■□□□□ 0.77
RFFL-211ENST00000584541 MTIF2P46199 727 aaKnown RBP19.89■□□□□ 0.77
RFFL-211ENST00000584541 KCNJ12Q14500 433 aa19.89■□□□□ 0.77
RFFL-211ENST00000584541 ENOX2Q16206 610 aaKnown RBP19.89■□□□□ 0.77
RFFL-211ENST00000584541 HSP90AA4PQ58FG1 418 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms