RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 RXRGP48443 463 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GMPSP49915 693 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CDK7P50613 346 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 JAG1P78504 1218 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 E2F2Q14209 437 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SUZ12Q15022 739 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GSTA3Q16772 222 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 METTL21CQ5VZV1 264 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CRACR2BQ8N4Y2 399 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPATA4Q8NEY3 305 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CEP95Q96GE4 821 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DNAJC18Q9H819 358 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 JADE2Q9NQC1 790 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 A0A1B0GTH6 734 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 APOEP02649 317 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LYNP07948 512 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZCCHC18P0CG32 403 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TXKP42681 527 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CARSP49589 748 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RTN1Q16799 776 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 KLHL35Q6PF15 583 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MARK2Q7KZI7 788 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF572Q7Z3I7 529 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 OSTM1Q86WC4 334 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FAM20CQ8IXL6 584 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FANCBQ8NB91 859 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GAB3Q8WWW8 586 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GMLQ99445 158 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 DDX50Q9BQ39 737 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HEPHQ9BQS7 1158 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HGH1Q9BTY7 390 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CSRNP2Q9H175 543 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FOXP1Q9H334 677 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CNOT10Q9H9A5 744 aaKnown RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CABP5Q9NP86 173 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PTTG2Q9NZH5 202 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GGT7Q9UJ14 662 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF646O15015 1829 aaPredicted RBP12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PSME4Q14997 1843 aa12.68□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ANO9A1A5B4 782 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TTLL13PA6NNM8 815 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 H0Y3Z8 333 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CYTH3O43739 400 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SH3BP5O60239 455 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PABPC4LP0CB38 370 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 STX17P56962 302 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 OCRLQ01968 901 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 RRP1BQ14684 758 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 COL19A1Q14993 1142 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CRY1Q16526 586 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 COBLL1Q53SF7 1204 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 AGBL2Q5U5Z8 902 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 C8orf74Q6P047 294 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPERTQ8NA61 448 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 OXER1Q8TDS5 423 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 STARD8Q92502 1023 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GFM2Q969S9 779 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 NMD3Q96D46 503 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 HSPBAP1Q96EW2 488 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 VAT1LQ9HCJ6 419 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF304Q9HCX3 659 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 STOML1Q9UBI4 398 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TRIM17Q9Y577 477 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SRPRBQ9Y5M8 271 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPDYE2BA6NHP3 402 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SHBGP04278 402 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SPDYE6P0CI01 402 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 AFMP43652 599 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ADRM1Q16186 407 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ARL13BQ3SXY8 428 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 WDR45BQ5MNZ6 344 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF579Q8NAF0 562 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 GOLM1Q8NBJ4 401 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PPP1R10Q96QC0 940 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 AS3MTQ9HBK9 375 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 IL1RAPL1Q9NZN1 696 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SCHIP1Q9P0W5 487 aaPredicted RBP12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SERPINA10Q9UK55 444 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TBC1D30Q9Y2I9 924 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TIAM2Q8IVF5 1701 aa12.67□□□□□ -0.38
CDK5RAP3-232ENST00000584168 WNT7AO00755 349 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MAP3K7O43318 606 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FGRP09769 529 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 CCDC159P0C7I6 412 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ERCC5P28715 1186 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 USP17L2Q6R6M4 530 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 C16orf86Q6ZW13 317 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PATL1Q86TB9 770 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MCF2L2Q86YR7 1114 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 FAM186BQ8IYM0 893 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 LRRC34Q8IZ02 419 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 EPSTI1Q96J88 318 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 PRPF18Q99633 342 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 TIMMDC1Q9NPL8 285 aa12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 ZNF70Q9UC06 446 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-232ENST00000584168 SERPINB13Q9UIV8 391 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms