RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 RBM17Q96I25 401 aaKnown RBP9.3□□□□□ -0.92
BDNF-219ENST00000584049 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 TMEM237Q96Q45 408 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 PCDHB18PQ96TA0 734 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 NUP85Q9BW27 656 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 TRAIPQ9BWF2 469 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 KCNK9Q9NPC2 374 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 PTPN22Q9Y2R2 807 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 EMSYQ7Z589 1322 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ABLIM1O14639 778 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ABHD2P08910 425 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 EEF2P13639 858 aaKnown RBP9.3□□□□□ -0.92
BDNF-219ENST00000584049 PRELPP51888 382 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 SLC18A1P54219 525 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ANKRD20A2Q5SQ80 823 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ODR4Q5SWX8 454 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ANKRD20A1Q5TYW2 823 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ANKRD20A3Q5VUR7 823 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 RGS9BPQ6ZS82 235 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ERICH1Q86X53 443 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 APLFQ8IW19 511 aaPredicted RBP9.3□□□□□ -0.92
BDNF-219ENST00000584049 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 GMCL1P1Q8NEA9 526 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 PIGOQ8TEQ8 1089 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 SH3TC2Q8TF17 1288 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 DYDC2Q96IM9 177 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 CCDC77Q9BR77 488 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 IKZF4Q9H2S9 585 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 TMEM206Q9H813 350 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 UBN1Q9NPG3 1134 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 CTNNAL1Q9UBT7 734 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 ASIC3Q9UHC3 531 aa9.3□□□□□ -0.92
BDNF-219ENST00000584049 KCNJ1P48048 391 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 VAMP7P51809 220 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 KCNQ4P56696 695 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SNRPFP62306 86 aaKnown RBP9.29□□□□□ -0.92
BDNF-219ENST00000584049 SYDE2Q5VT97 1194 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 CGB2Q6NT52 195 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 HHIPL2Q6UWX4 724 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 OTUD6AQ7L8S5 288 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 ANKRD35Q8N283 1001 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 ANKRD42Q8N9B4 389 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 ARMC2Q8NEN0 867 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 INPP5DQ92835 1189 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 FAM212AQ96EL1 285 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 RMDN2Q96LZ7 410 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 COA1Q9GZY4 146 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 EURLQ9NYK6 297 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 PNMA3Q9UL41 463 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 STARD13Q9Y3M8 1113 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 MYH11P35749 1972 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 THAP12O43422 761 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 CREB1P16220 341 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 IL9RQ01113 521 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 CENPCQ03188 943 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SF3A3Q12874 501 aaKnown RBP eCLIP9.29□□□□□ -0.92
BDNF-219ENST00000584049 CAPRIN2Q6IMN6 1127 aaKnown RBP9.29□□□□□ -0.92
BDNF-219ENST00000584049 TPH2Q8IWU9 490 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SYCP3Q8IZU3 236 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 KIF2BQ8N4N8 673 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 PRCCQ92733 491 aaPredicted RBP9.29□□□□□ -0.92
BDNF-219ENST00000584049 NINJ2Q9NZG7 142 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 TAF1LQ8IZX4 1826 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 ATF2P15336 505 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 TAC1P20366 129 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 YARSP54577 528 aaKnown RBP9.29□□□□□ -0.92
BDNF-219ENST00000584049 GTF2IP78347 998 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 MPP2Q14168 576 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SETDB1Q15047 1291 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 NOP9Q86U38 636 aaKnown RBP9.29□□□□□ -0.92
BDNF-219ENST00000584049 ECHDC2Q86YB7 292 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 LARGE2Q8N3Y3 721 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SHC3Q92529 594 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 ZNF653Q96CK0 615 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 WDR11Q9BZH6 1224 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 POLLQ9UGP5 575 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 SIPA1L1O43166 1804 aa9.29□□□□□ -0.92
BDNF-219ENST00000584049 HIP1RO75146 1068 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 CHKAP35790 457 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 POLGP54098 1239 aaPredicted RBP9.28□□□□□ -0.92
BDNF-219ENST00000584049 FMO1Q01740 532 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 MGAT5Q09328 741 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 RASA3Q14644 834 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 PRR5LQ6MZQ0 368 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.28□□□□□ -0.92
BDNF-219ENST00000584049 SPICE1Q8N0Z3 855 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 ANKLE1Q8NAG6 615 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 SPDL1Q96EA4 605 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 GGT7Q9UJ14 662 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 STK38LQ9Y2H1 464 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 BTAF1O14981 1849 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 CLDN3O15551 220 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 HOXA10P31260 410 aaPredicted RBP9.28□□□□□ -0.92
BDNF-219ENST00000584049 ITGA8P53708 1063 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 CDC42EP5Q6NZY7 148 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 RNPEPL1Q9HAU8 725 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 LRRC42Q9Y546 428 aa9.28□□□□□ -0.92
BDNF-219ENST00000584049 USH1CQ9Y6N9 552 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms