RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 REXO2Q9Y3B8 237 aaKnown RBP5.22□□□□□ -1.57
PPP4R1-227ENST00000583988 KRTAP23-1A1A580 65 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 FAM171A2A8MVW0 826 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 HOXA3O43365 443 aaPredicted RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 NDUFS2O75306 463 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 GSPT1P15170 499 aaKnown RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 ZSCAN20P17040 1043 aaPredicted RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 CYP2C19P33261 490 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 MCAMP43121 646 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 SCNN1GP51170 649 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 NPEPPSP55786 919 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 PPP3CAQ08209 521 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 CNGB1Q14028 1251 aaPredicted RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 ACAP2Q15057 778 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 FKBP15Q5T1M5 1219 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 CXorf57Q6NSI4 855 aaKnown RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 TMPRSS6Q8IU80 811 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 ELOA2Q8IYF1 753 aaPredicted RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 LILRA3Q8N6C8 439 aaPredicted RBP5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 PGBD4Q96DM1 585 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 HSPBAP1Q96EW2 488 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 ADI1Q9BV57 179 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 MMRN2Q9H8L6 949 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 PARPBPQ9NWS1 579 aa5.21□□□□□ -1.58
PPP4R1-227ENST00000583988 AKR1B10O60218 316 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 PRAMEF4O60810 478 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 GYPEP15421 78 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 C5AR1P21730 350 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 CASRP41180 1078 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 TGFB2P61812 414 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 DUSP2Q05923 314 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 MGAT2Q10469 447 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 MRPL49Q13405 166 aaKnown RBP5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 GTF2H3Q13889 308 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ODF1Q14990 250 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 PPP2R5AQ15172 486 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 NXNQ6DKJ4 435 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 Q6ZVL8 140 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 CHPFQ8IZ52 775 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 MIER2Q8N344 545 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 MB21D1Q8N884 522 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 OR5M3Q8NGP4 307 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 CYFIP2Q96F07 1278 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ZNF512Q96ME7 567 aaPredicted RBP5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 GPR87Q9BY21 358 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 RHOBTB2Q9BYZ6 727 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ZNF703Q9H7S9 590 aaPredicted RBP5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 SLC2A4RGQ9NR83 387 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 GPRC5DQ9NZD1 345 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ZIM2Q9NZV7 527 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 KLHL42Q9P2K6 505 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ZNF180Q9UJW8 692 aa5.2□□□□□ -1.58
PPP4R1-227ENST00000583988 ITGA10O75578 1167 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 ENDOD1O94919 500 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 ZRANB2O95218 330 aaKnown RBP eCLIP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 RPLP2P05387 115 aaKnown RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 CRHR1P34998 444 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 MAN2A2P49641 1150 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 MST1LQ2TV78 715 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 FAM102BQ5T8I3 360 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 FNDC7Q5VTL7 733 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 TCEAL8Q8IYN2 117 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 PPM1NQ8N819 430 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 ZNF483Q8TF39 744 aaPredicted RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 ATXN2LQ8WWM7 1075 aaKnown RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 JPH3Q8WXH2 748 aaPredicted RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 HOXB13Q92826 284 aaPredicted RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 COA7Q96BR5 231 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 AIFM3Q96NN9 605 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 SLITRK6Q9H5Y7 841 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 BCO1Q9HAY6 547 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 GEMIN8Q9NWZ8 242 aaKnown RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 TRPS1Q9UHF7 1281 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 IP6K2Q9UHH9 426 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 TUBD1Q9UJT1 453 aa5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 G3BP2Q9UN86 482 aaKnown RBP5.19□□□□□ -1.58
PPP4R1-227ENST00000583988 SGTAO43765 313 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 ADH4P08319 380 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 CT47B1P0C2W7 299 aaPredicted RBP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 MAKP20794 623 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 ADSLP30566 484 aaPredicted RBP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 RRP12Q5JTH9 1297 aaKnown RBP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 PPP4R3AQ6IN85 833 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 MFSD5Q6N075 450 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 PDZD4Q76G19 769 aaPredicted RBP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 OR7D4Q8NG98 312 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 ZNF480Q8WV37 535 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 HDAC10Q969S8 669 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 CLIP3Q96DZ5 547 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 IL17RAQ96F46 866 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 RTFDC1Q9BY42 306 aaPredicted RBP5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 EPC1Q9H2F5 836 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 DMRT3Q9NQL9 472 aa5.18□□□□□ -1.58
PPP4R1-227ENST00000583988 GOLGA6CA6NDK9 693 aa5.17□□□□□ -1.58
PPP4R1-227ENST00000583988 GOLGA6BA6NDN3 693 aa5.17□□□□□ -1.58
PPP4R1-227ENST00000583988 TSPAN6O43657 245 aa5.17□□□□□ -1.58
PPP4R1-227ENST00000583988 FAM20BO75063 409 aa5.17□□□□□ -1.58
PPP4R1-227ENST00000583988 MFAP3LO75121 409 aa5.17□□□□□ -1.58
PPP4R1-227ENST00000583988 RPS6KA4O75676 772 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms