RNA–Protein interactions for RNA: ENST00000583775.1

PRKCA-205, Transcript of protein kinase C alpha, humanhuman

TSL 3

Gene PRKCA, Length 321 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-205ENST00000583775 C7orf25Q9BPX7 421 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 SRRTQ9BXP5 876 aaKnown RBP6.85□□□□□ -1.31
PRKCA-205ENST00000583775 RAB34Q9BZG1 259 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 TANGO6Q9C0B7 1094 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 UBA5Q9GZZ9 404 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 TNKS2Q9H2K2 1166 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 FAM86C1Q9NVL1 165 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 INTS13Q9NVM9 706 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 LIMA1Q9UHB6 759 aaKnown RBP6.85□□□□□ -1.31
PRKCA-205ENST00000583775 HDAC9Q9UKV0 1011 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 ATAD5Q96QE3 1844 aa6.85□□□□□ -1.31
PRKCA-205ENST00000583775 LOXHD1Q8IVV2 1947 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ITIH6Q6UXX5 1313 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SYNRGQ9UMZ2 1314 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 PVALEFA0A1B0GWK0 134 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 F5H6K3 240 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 H7C1D1 291 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 DYNC1I1O14576 645 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 TBX3O15119 743 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 CCP110O43303 1012 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 KLRC4O43908 158 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ATE1O95260 518 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 CST3P01034 146 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 FOSP01100 380 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 KRT1P04264 644 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SFPQP23246 707 aaKnown RBP eCLIP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 AFMP43652 599 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SOX9P48436 509 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 EIF6P56537 245 aaKnown RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 AMPD3Q01432 767 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 KLRC3Q07444 240 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SEPT2Q15019 361 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ABCB5Q2M3G0 1257 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SLFN13Q68D06 897 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 SPECC1LQ69YQ0 1117 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ISM2Q6H9L7 571 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ARMCX5Q6P1M9 558 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 LILRA6Q6PI73 481 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 CABP7Q86V35 215 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 MCF2L2Q86YR7 1114 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 GRAMD1CQ8IYS0 662 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ADSSL1Q8N142 457 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 KCT2Q8NC54 265 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 GIMAP8Q8ND71 665 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 MYRIPQ8NFW9 859 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 NOC3LQ8WTT2 800 aaKnown RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 DHTKD1Q96HY7 919 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 PRMT6Q96LA8 375 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 NAP1L5Q96NT1 182 aaPredicted RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 MMTAG2Q9BU76 263 aaKnown RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 DUSP23Q9BVJ7 150 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 LRRC27Q9C0I9 530 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 DEFB129Q9H1M3 183 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 CPVLQ9H3G5 476 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 PSTPIP2Q9H939 334 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 PRDM10Q9NQV6 1147 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 FAM53CQ9NYF3 392 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 TMOD2Q9NZR1 351 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ADD3Q9UEY8 706 aaKnown RBP6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ADAM30Q9UKF2 790 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 ZNRF3Q9ULT6 936 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 PAXBP1Q9Y5B6 917 aa6.84□□□□□ -1.31
PRKCA-205ENST00000583775 COL4A5P29400 1685 aa6.84□□□□□ -1.32
PRKCA-205ENST00000583775 CNTNAP1P78357 1384 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 FRMPD2Q68DX3 1309 aaPredicted RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 LTBP3Q9NS15 1303 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 PRRG2O14669 202 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 STX10O60499 249 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CCNT1O60563 726 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 LRIG2O94898 1065 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 RAG1P15918 1043 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 GBP1P32455 592 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CIITAP33076 1130 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 SLC1A4P43007 532 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 YARSP54577 528 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 ICA1Q05084 483 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 PAK1Q13153 545 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 KARSQ15046 597 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 DLGAP5Q15398 846 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CALCRLQ16602 461 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 TMEM266Q2M3C6 531 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 QRICH1Q2TAL8 776 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 LETM2Q2VYF4 491 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 TMEM119Q4V9L6 283 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 TMEM201Q5SNT2 666 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 FAM214BQ7L5A3 538 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 RASGRP2Q7LDG7 609 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 TMC6Q7Z403 805 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 FILIP1Q7Z7B0 1213 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 ZSWIM9Q86XI8 627 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 HOMER1Q86YM7 354 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 MRPL41Q8IXM3 137 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CCAR2Q8N163 923 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 FAM169BQ8N8A8 192 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 DPF2Q92785 391 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CCDC47Q96A33 483 aaKnown RBP6.83□□□□□ -1.32
PRKCA-205ENST00000583775 COA7Q96BR5 231 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CCDC51Q96ER9 411 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 CALML4Q96GE6 196 aa6.83□□□□□ -1.32
PRKCA-205ENST00000583775 SEC16BQ96JE7 1060 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms