RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 JPH2Q9BR39 696 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 UNC45AQ9H3U1 944 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 C6orf50Q9HD87 102 aa8.53□□□□□ -1.04
CCDC47-205ENST00000582331 FAM217BQ9NTX9 383 aaPredicted RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.53□□□□□ -1.04
CCDC47-205ENST00000582331 PATJQ8NI35 1801 aa8.52□□□□□ -1.04
CCDC47-205ENST00000582331 TMEM150BA6NC51 233 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 DDX11L8A8MPP1 907 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 ADAMTS3O15072 1205 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MSH4O15457 936 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 ZBTB43O43298 467 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 STBD1O95210 358 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 RETP07949 1114 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 HNRNPA1P09651 372 aaKnown RBP eCLIP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 NTHL1P78549 312 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 PLCB2Q00722 1185 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 CREMQ03060 361 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 DMWDQ09019 674 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 LPAL2Q16609 132 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 USP41Q3LFD5 358 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 UBXN11Q5T124 520 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 LRCH2Q5VUJ6 765 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 LAIR1Q6GTX8 287 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 APOA5Q6Q788 366 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 TPRG1Q6ZUI0 275 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MIER3Q7Z3K6 550 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 REXO1Q8N1G1 1221 aaKnown RBP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 RDM1Q8NG50 284 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 SLC5A5Q92911 643 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 TATDN2Q93075 761 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 LENG9Q96B70 501 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 B3GALT6Q96L58 329 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MBOAT7Q96N66 472 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 GAD1Q99259 594 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 SH2D3AQ9BRG2 576 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 PHF20Q9BVI0 1012 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 TEKT3Q9BXF9 490 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 GPR62Q9BZJ7 368 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 IFT122Q9HBG6 1241 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 PRMT8Q9NR22 394 aaPredicted RBP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 RALYQ9UKM9 306 aaKnown RBP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MRPS17Q9Y2R5 130 aaKnown RBP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 GPR179Q6PRD1 2367 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MYH15Q9Y2K3 1946 aa8.52□□□□□ -1.05
CCDC47-205ENST00000582331 MTCL1Q9Y4B5 1905 aaKnown RBP8.52□□□□□ -1.05
CCDC47-205ENST00000582331 WDR81Q562E7 1941 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 CHD6Q8TD26 2715 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 COL4A3Q01955 1670 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ESYT2A0FGR8 921 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ARL5CA6NH57 179 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 F8W810 466 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 SLC27A2O14975 620 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 LRP3O75074 770 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 TADA2AO75478 443 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 SRGAP2CP0DJJ0 459 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 RPL17P18621 184 aaKnown RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 GNA11P29992 359 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 HOXA11P31270 313 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 DSC1Q08554 894 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ADCY1Q08828 1119 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 MTAPQ13126 283 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 FZD5Q13467 585 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 COL9A2Q14055 689 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 PFKFB3Q16875 520 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 PPM1LQ5SGD2 360 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 LIN9Q5TKA1 542 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 FUT10Q6P4F1 479 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ZNF852Q6ZMS4 543 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 SRGAP1Q7Z6B7 1085 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 SMG8Q8ND04 991 aaKnown RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ITFG1Q8TB96 612 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 CCDC12Q8WUD4 166 aaPredicted RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 DDX1Q92499 740 aaKnown RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 KXD1Q9BQD3 176 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 MIOSQ9NXC5 875 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 POLIQ9UNA4 740 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 IPPQ9Y573 584 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 COL4A3BPQ9Y5P4 624 aa8.51□□□□□ -1.05
CCDC47-205ENST00000582331 MAP1BP46821 2468 aaKnown RBP8.51□□□□□ -1.05
CCDC47-205ENST00000582331 GOLGA8AA7E2F4 631 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 GOLGA8BA8MQT2 603 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 CCL16O15467 120 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 XYLBO75191 536 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 C8AP07357 584 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 HOXA9P31269 272 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 MLH1P40692 756 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 SCNN1GP51170 649 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 USP11P51784 963 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 NCBP1Q09161 790 aaKnown RBP8.5□□□□□ -1.05
CCDC47-205ENST00000582331 CSRP2Q16527 193 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 CREB3L3Q68CJ9 461 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 PRSS55Q6UWB4 352 aaPredicted RBP8.5□□□□□ -1.05
CCDC47-205ENST00000582331 PRR23CQ6ZRP0 262 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 PRR23BQ6ZRT6 265 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 ANO5Q75V66 913 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 EXOC8Q8IYI6 725 aa8.5□□□□□ -1.05
CCDC47-205ENST00000582331 PRPF31Q8WWY3 499 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms