RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 GDPD5Q8WTR4 605 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 ERCC4Q92889 916 aaPredicted RBP17.96■□□□□ 0.47
RNF43-206ENST00000582293 BICD1Q96G01 975 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 ACCSQ96QU6 501 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 NRDE2Q9H7Z3 1164 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 SLC39A2Q9NP94 309 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 UBN1Q9NPG3 1134 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 LMBRD1Q9NUN5 540 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 DNAJB4Q9UDY4 337 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 PARP2Q9UGN5 583 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 GDAQ9Y2T3 454 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 PCDHB13Q9Y5F0 798 aa17.96■□□□□ 0.47
RNF43-206ENST00000582293 PLXNA4Q9HCM2 1894 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 EIF3DO15371 548 aaKnown RBP eCLIP17.95■□□□□ 0.46
RNF43-206ENST00000582293 CLDN3O15551 220 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 POMCP01189 267 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 CTNNB1P35222 781 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 TNFSF9P41273 254 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 DSC1Q08554 894 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 ALCAMQ13740 583 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 NAB2Q15742 525 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 BMT2Q1RMZ1 405 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 XKR4Q5GH76 650 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 THNSL1Q8IYQ7 743 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 COLGALT1Q8NBJ5 622 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 ZSWIM2Q8NEG5 633 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 FBXO22Q8NEZ5 403 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 SPATA20Q8TB22 786 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 MYLIPQ8WY64 445 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 SAMD11Q96NU1 681 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 TCHPQ9BT92 498 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 MRPL9Q9BYD2 267 aaKnown RBP17.95■□□□□ 0.46
RNF43-206ENST00000582293 ATG2AQ2TAZ0 1938 aa17.95■□□□□ 0.46
RNF43-206ENST00000582293 H3BNC9 293 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 TGFB1I1O43294 461 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 RHOBTB3O94955 611 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 SLC10A6Q3KNW5 377 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 KANK3Q6NY19 840 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 TMEM173Q86WV6 379 aaPredicted RBP17.94■□□□□ 0.46
RNF43-206ENST00000582293 RSPH1Q8WYR4 309 aa17.94■□□□□ 0.46
RNF43-206ENST00000582293 TDRD15B5MCY1 1934 aaKnown RBP17.94■□□□□ 0.46
RNF43-206ENST00000582293 RB1P06400 928 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 LAG3P18627 525 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 DNAJB1P25685 340 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 BCAR1P56945 870 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 CAMK1Q14012 370 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 KCNB1Q14721 858 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 KCNT2Q6UVM3 1135 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 CRELD2Q6UXH1 353 aaPredicted RBP17.93■□□□□ 0.46
RNF43-206ENST00000582293 ELOA2Q8IYF1 753 aaPredicted RBP17.93■□□□□ 0.46
RNF43-206ENST00000582293 COLGALT2Q8IYK4 626 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 HACE1Q8IYU2 909 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 KLHL23Q8NBE8 558 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 BCL7CQ8WUZ0 217 aaPredicted RBP17.93■□□□□ 0.46
RNF43-206ENST00000582293 P2RX5Q93086 422 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 SNX27Q96L92 541 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 ZMAT2Q96NC0 199 aaKnown RBP17.93■□□□□ 0.46
RNF43-206ENST00000582293 CBWD1Q9BRT8 395 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 PLVAPQ9BX97 442 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 EXOC1Q9NV70 894 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 CACNG4Q9UBN1 327 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 CPSF3Q9UKF6 684 aaKnown RBP17.93■□□□□ 0.46
RNF43-206ENST00000582293 TRIP11Q15643 1979 aa17.93■□□□□ 0.46
RNF43-206ENST00000582293 NT5C1B-RDH14C9J2C7 533 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 OGTO15294 1046 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 GRM6O15303 877 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 ITGB1P05556 798 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 GALTP07902 379 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 SLC11A1P49279 550 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 PSMD2Q13200 908 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 GPM6BQ13491 265 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 APBB1IPQ7Z5R6 666 aaPredicted RBP17.92■□□□□ 0.46
RNF43-206ENST00000582293 NELFCDQ8IXH7 590 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 SLC39A11Q8N1S5 342 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 SPPL3Q8TCT6 385 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 URGCPQ8TCY9 931 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 PPP1R10Q96QC0 940 aaKnown RBP17.92■□□□□ 0.46
RNF43-206ENST00000582293 MSTO1Q9BUK6 570 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 CCDC94Q9BW85 323 aaPredicted RBP17.92■□□□□ 0.46
RNF43-206ENST00000582293 GBP3Q9H0R5 595 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 TMEM206Q9H813 350 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 KANSL3Q9P2N6 904 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 RWDD3Q9Y3V2 267 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 PCDHA5Q9Y5H7 936 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 PDCD11Q14690 1871 aaKnown RBP17.92■□□□□ 0.46
RNF43-206ENST00000582293 UBE4BO95155 1302 aa17.92■□□□□ 0.46
RNF43-206ENST00000582293 SMIM28A0A1B0GU29 152 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 F8W810 466 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 ZC3H11AO75152 810 aaKnown RBP eCLIP17.91■□□□□ 0.46
RNF43-206ENST00000582293 ADRB2P07550 413 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 CXCL8P10145 99 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 POU3F3P20264 500 aaPredicted RBP17.91■□□□□ 0.46
RNF43-206ENST00000582293 GRIK3Q13003 919 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 ENOX2Q16206 610 aaKnown RBP17.91■□□□□ 0.46
RNF43-206ENST00000582293 GLRA4Q5JXX5 417 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 SPOUT1Q5T280 376 aaKnown RBP17.91■□□□□ 0.46
RNF43-206ENST00000582293 TMEM130Q8N3G9 435 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 ZNF558Q96NG5 402 aa17.91■□□□□ 0.46
RNF43-206ENST00000582293 ACAP3Q96P50 834 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms