RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 FAM213AQ9BRX8 229 aa24.47■■□□□ 1.51
CCDC47-204ENST00000582252 CASP8AP2Q9UKL3 1982 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 GRID2IPA4D2P6 1211 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 CES2O00748 559 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 TMEM253P0C7T8 217 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 EFNA5P52803 228 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 FCGRTP55899 365 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 CFAP221Q4G0U5 840 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 ENOSF1Q7L5Y1 443 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 FNBP1Q96RU3 617 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 RAB20Q9NX57 234 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.46■■□□□ 1.51
CCDC47-204ENST00000582252 AGO2Q9UKV8 859 aaKnown RBP24.46■■□□□ 1.51
CCDC47-204ENST00000582252 ZSWIM8A7E2V4 1837 aa24.46■■□□□ 1.51
CCDC47-204ENST00000582252 ARIH2O95376 493 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 RGS2P41220 211 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 PSMD6Q15008 389 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 KRT222Q8N1A0 295 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 PPM1KQ8N3J5 372 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 ATP8B4Q8TF62 1192 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 SCFD2Q8WU76 684 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 RUBCNQ92622 972 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 USP6NLQ92738 828 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 SPATA33Q96N06 139 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 TINF2Q9BSI4 451 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 SEPT11Q9NVA2 429 aaKnown RBP24.45■■□□□ 1.5
CCDC47-204ENST00000582252 NCANO14594 1321 aa24.45■■□□□ 1.5
CCDC47-204ENST00000582252 NCK2O43639 380 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 ECM2O94769 699 aaPredicted RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 GALCP54803 685 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 HTRA3P83110 453 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 LACTBP83111 547 aaPredicted RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 MMGT1Q8N4V1 131 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 NPLOC4Q8TAT6 608 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 COG1Q8WTW3 980 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 PSPC1Q8WXF1 523 aaKnown RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 SMARCAD1Q9H4L7 1026 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 TULP1O00294 542 aaPredicted RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 ADCY3O60266 1144 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 FTCDO95954 541 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 DLATP10515 647 aaKnown RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 MXD4Q14582 209 aaPredicted RBP24.44■■□□□ 1.5
CCDC47-204ENST00000582252 RPS6KA1Q15418 735 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 CCDC62Q6P9F0 684 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 RFFLQ8WZ73 363 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 PNKPQ96T60 521 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 APBA2Q99767 749 aa24.44■■□□□ 1.5
CCDC47-204ENST00000582252 ANKRD62A6NC57 917 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 SPDYE4A6NLX3 237 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 PDE2AO00408 941 aaPredicted RBP24.43■■□□□ 1.5
CCDC47-204ENST00000582252 TBC1D8O95759 1140 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 TXNP10599 105 aaKnown RBP24.43■■□□□ 1.5
CCDC47-204ENST00000582252 MATR3P43243 847 aaKnown RBP eCLIP24.43■■□□□ 1.5
CCDC47-204ENST00000582252 CAPSQ13938 189 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 MAP9Q49MG5 647 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 ZPBP2Q6X784 338 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 SV2AQ7L0J3 742 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 ZBTB8OSQ8IWT0 167 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 FAM71AQ8IYT1 594 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 TPCN2Q8NHX9 752 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 SHC3Q92529 594 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 RNF186Q9NXI6 227 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 FAM53CQ9NYF3 392 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 GJD2Q9UKL4 321 aa24.43■■□□□ 1.5
CCDC47-204ENST00000582252 SNAI1O95863 264 aaPredicted RBP24.42■■□□□ 1.5
CCDC47-204ENST00000582252 USP8P40818 1118 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 PSMC4P43686 418 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 CLDN10P78369 228 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 HSDL1Q3SXM5 330 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 SPATA4Q8NEY3 305 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 PBKQ96KB5 322 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 C2orf40Q9H1Z8 148 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 ABHD16BQ9H3Z7 469 aa24.42■■□□□ 1.5
CCDC47-204ENST00000582252 TRPA1O75762 1119 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 SP3Q02447 781 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 IRF5Q13568 498 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 LONRF2Q1L5Z9 754 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 OLIG1Q8TAK6 271 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 SEMA4DQ92854 862 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 POP1Q99575 1024 aaKnown RBP24.41■■□□□ 1.5
CCDC47-204ENST00000582252 MSTO1Q9BUK6 570 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 KATNBL1Q9H079 304 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 RBM47A0AV96 593 aaKnown RBP24.41■■□□□ 1.5
CCDC47-204ENST00000582252 HBP1O60381 514 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 SEC31AO94979 1220 aaKnown RBP24.41■■□□□ 1.5
CCDC47-204ENST00000582252 CTGFP29279 349 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 CXCR5P32302 372 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 GCNT1Q02742 428 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 C2orf54Q08AI8 447 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 WDR44Q5JSH3 913 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 OLFML2BQ68BL8 750 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 RHOT2Q8IXI1 618 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 LRRC57Q8N9N7 239 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 HELQQ8TDG4 1101 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 TAS1R2Q8TE23 839 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 PSMB7Q99436 277 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 SELENOOQ9BVL4 669 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 TOPORSQ9NS56 1045 aaPredicted RBP24.41■■□□□ 1.5
CCDC47-204ENST00000582252 C1orf112Q9NSG2 853 aa24.41■■□□□ 1.5
CCDC47-204ENST00000582252 KIF4AO95239 1232 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms