RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 HSD3B7Q9H2F3 369 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 ELAC1Q9H777 363 aaKnown RBP12.54□□□□□ -0.4
GGA3-211ENST00000582232 RNF216Q9NWF9 866 aaPredicted RBP12.54□□□□□ -0.4
GGA3-211ENST00000582232 FRMD4BQ9Y2L6 1034 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 NFE2L3Q9Y4A8 694 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 IPPQ9Y573 584 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 ANK1P16157 1881 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 RALGAPA2Q2PPJ7 1873 aa12.54□□□□□ -0.4
GGA3-211ENST00000582232 TRIP11Q15643 1979 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 ZNF233A6NK53 670 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 BECN2A8MW95 431 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ZNF18P17022 549 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 SYN1P17600 705 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 CASP4P49662 377 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 SNRNP35Q16560 246 aaKnown RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 FRMD5Q7Z6J6 570 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ZNF598Q86UK7 904 aaKnown RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 GAS2L3Q86XJ1 694 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ECHDC2Q86YB7 292 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 FAM114A1Q8IWE2 563 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 THNSL1Q8IYQ7 743 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 HACE1Q8IYU2 909 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 CRIPAKQ8N1N5 446 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 CEP120Q8N960 986 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ZSWIM2Q8NEG5 633 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 FAM213AQ9BRX8 229 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 CCDC94Q9BW85 323 aaPredicted RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 PLEKHA5Q9HAU0 1116 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 METTL14Q9HCE5 456 aaKnown RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 FANCLQ9NW38 375 aa12.53□□□□□ -0.4
GGA3-211ENST00000582232 ZMYND8Q9ULU4 1186 aaPredicted RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 PDCD11Q14690 1871 aaKnown RBP12.53□□□□□ -0.4
GGA3-211ENST00000582232 TTC26A0AVF1 554 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 GOLGA8IPA6NC78 632 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 GOLGA8JA6NMD2 632 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 INPPL1O15357 1258 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 EPB41P11171 864 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 ACTN1P12814 892 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 ATF7P17544 494 aaPredicted RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 EEF1GP26641 437 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 TNFSF9P41273 254 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 ACOT2P49753 483 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 ENOX2Q16206 610 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 XKR4Q5GH76 650 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 ZBTB41Q5SVQ8 909 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 CEP135Q66GS9 1140 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 PSRC1Q6PGN9 363 aaPredicted RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 ALKAL1Q6UXT8 129 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 INTS8Q75QN2 995 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 LUZP1Q86V48 1076 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 CBWD2Q8IUF1 395 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 BRSK2Q8IWQ3 736 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 CD302Q8IX05 232 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 TMEM192Q8IY95 271 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 FAM186BQ8IYM0 893 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 TMC2Q8TDI7 906 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 RSPH1Q8WYR4 309 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 PGBD4Q96DM1 585 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 TSPAN18Q96SJ8 248 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 LBHD1Q9BQE6 289 aaPredicted RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 NXF3Q9H4D5 531 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 SAMSN1Q9NSI8 373 aaKnown RBP12.52□□□□□ -0.41
GGA3-211ENST00000582232 TMEM161AQ9NX61 479 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 SNTG2Q9NY99 539 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 GIT1Q9Y2X7 761 aa12.52□□□□□ -0.41
GGA3-211ENST00000582232 LRRC10BA6NIK2 292 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 MEFVO15553 781 aaPredicted RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 RECQL4O94761 1208 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 IL18RAPO95256 599 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 FGBP02675 491 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 ACRP10323 421 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 ITGA4P13612 1032 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 CLDN10P78369 228 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 SPAG1Q07617 926 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 PSMD6Q15008 389 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 SURF1Q15526 300 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 SLC10A6Q3KNW5 377 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 SEZ6Q53EL9 994 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 TMEM240Q5SV17 173 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 AGMOQ6ZNB7 445 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 ZNF365Q70YC5 407 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 NT5DC4Q86YG4 428 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 HERVK_113Q902F9 699 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 EEF2KMTQ96G04 330 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 CNOT6LQ96LI5 555 aaKnown RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 ASB7Q9H672 318 aa12.51□□□□□ -0.41
GGA3-211ENST00000582232 RPF1Q9H9Y2 349 aaKnown RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 TOPORSQ9NS56 1045 aaPredicted RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 RBAKQ9NYW8 714 aaPredicted RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 ARMCX3Q9UH62 379 aaPredicted RBP12.51□□□□□ -0.41
GGA3-211ENST00000582232 HES2Q9Y543 173 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms