RNA–Protein interactions for RNA: ENST00000581536.5

TOP3A-211, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-211ENST00000581536 TAS1R1Q7RTX1 841 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 TMC7Q7Z402 723 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 DAW1Q8N136 415 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 RABGGTAQ92696 567 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 TCF25Q9BQ70 676 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 VN1R3Q9BXE9 311 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 RAB34Q9BZG1 259 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 CCDC113Q9H0I3 377 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 NXF3Q9H4D5 531 aaKnown RBP10.72□□□□□ -0.69
TOP3A-211ENST00000581536 CACNG4Q9UBN1 327 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
TOP3A-211ENST00000581536 TTC28Q96AY4 2481 aa10.72□□□□□ -0.69
TOP3A-211ENST00000581536 CCDC169A6NNP5 214 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 K7ELQ4 463 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 CITO14578 2027 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 NRP1O14786 923 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SPTLC1O15269 473 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 HIP1RO75146 1068 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 ALDH2P05091 517 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SSBP05455 408 aaKnown RBP eCLIP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 NDUFV2P19404 249 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SCNN1GP51170 649 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 PEX3P56589 373 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 CEBPZQ03701 1054 aaKnown RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 DUSP6Q16828 381 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 CSPP1Q1MSJ5 1256 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 ARSHQ5FYA8 562 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SPECC1Q5M775 1068 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 HYIQ5T013 277 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 EEF1DP3Q658K8 133 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 KANK3Q6NY19 840 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 LLGL2Q6P1M3 1020 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SLC27A1Q6PCB7 646 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 USP49Q70CQ1 688 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 CABP7Q86V35 215 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 ZBTB8OSQ8IWT0 167 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 FAM178BQ8IXR5 827 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 EFHBQ8N7U6 833 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 DEPTORQ8TB45 409 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 IGSF21Q96ID5 467 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 MSLNLQ96KJ4 702 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 FAM193BQ96PV7 902 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 APOL5Q9BWW9 433 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 MRPL9Q9BYD2 267 aaKnown RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 PDZD7Q9H5P4 517 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 ENTPD7Q9NQZ7 604 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 PRMT7Q9NVM4 692 aaPredicted RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 PARP2Q9UGN5 583 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 PUF60Q9UHX1 559 aaKnown RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 LZTS1Q9Y250 596 aa10.71□□□□□ -0.69
TOP3A-211ENST00000581536 MTCL1Q9Y4B5 1905 aaKnown RBP10.71□□□□□ -0.69
TOP3A-211ENST00000581536 DOCK6Q96HP0 2047 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PLXNA3P51805 1871 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 C2orf71A6NGG8 1288 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 ACKR2O00590 384 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MBTPS2O43462 519 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 NCK2O43639 380 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PRKCBP05771 671 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PLA2G4BP0C869 781 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 IGFBP6P24592 240 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MARCKSP29966 332 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 CA8P35219 290 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MLH1P40692 756 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 NAMPTP43490 491 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 NPTX2P47972 431 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 NDUFV1P49821 464 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 SLC12A3P55017 1021 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 RESTQ13127 1097 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MAPK7Q13164 816 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PRPF4BQ13523 1007 aaKnown RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 KCNC3Q14003 757 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 DHX8Q14562 1220 aaKnown RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PTPAQ15257 358 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 PCBP1Q15365 356 aaKnown RBP eCLIP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 FAM187BQ17R55 369 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 ARL6IP4Q66PJ3 421 aaKnown RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 TAS1R3Q7RTX0 852 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 COLGALT2Q8IYK4 626 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 VPS52Q8N1B4 723 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MRPL43Q8N983 215 aaKnown RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 SYT2Q8N9I0 419 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 CNNM3Q8NE01 707 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 FEZF2Q8TBJ5 459 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 URGCPQ8TCY9 931 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 INTS4Q96HW7 963 aaKnown RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 IFT74Q96LB3 600 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 CLIC6Q96NY7 704 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
TOP3A-211ENST00000581536 EPHX3Q9H6B9 360 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 MTMR6Q9Y217 621 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 FAN1Q9Y2M0 1017 aa10.7□□□□□ -0.7
TOP3A-211ENST00000581536 CNTNAP2Q9UHC6 1331 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 K7ERI5 159 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 SLC16A4O15374 487 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 CLASP2O75122 1294 aaKnown RBP10.69□□□□□ -0.7
TOP3A-211ENST00000581536 PPM1AP35813 382 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 GGCXP38435 758 aa10.69□□□□□ -0.7
TOP3A-211ENST00000581536 OR1G1P47890 313 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms