RNA–Protein interactions for RNA: ENST00000580947.1

SUPT4H1-204, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 4 BASIC

Gene SUPT4H1, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-204ENST00000580947 APOL5Q9BWW9 433 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 GPR62Q9BZJ7 368 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 NT5C3AQ9H0P0 336 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 ADAM7Q9H2U9 754 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 TMEM134Q9H6X4 195 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 C17orf75Q9HAS0 396 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 BLOC1S4Q9NUP1 217 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 RAPGEFL1Q9UHV5 662 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 TNFSF13BQ9Y275 285 aa11.66□□□□□ -0.54
SUPT4H1-204ENST00000580947 FAM86C2PA6NEL3 165 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 K7ERI5 159 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 PAPLNO95428 1278 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 BRD1O95696 1058 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 SSBP05455 408 aaKnown RBP eCLIP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 PLA2G4BP0C869 781 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 ALADP13716 330 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 IGFBP6P24592 240 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 CLCN4P51793 760 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 DSG1Q02413 1049 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 DMP1Q13316 513 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 TUSC3Q13454 348 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 SF3A1Q15459 793 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 DCAF4L1Q3SXM0 396 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 XKR4Q5GH76 650 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 TMEM31Q5JXX7 168 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 CD300LGQ6UXG3 332 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 CABP7Q86V35 215 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 GPR65Q8IYL9 337 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 C12orf76Q8N812 135 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 TMEM161BQ8NDZ6 487 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 RABGGTAQ92696 567 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 B3GALT6Q96L58 329 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 PPP1R10Q96QC0 940 aaKnown RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 CDT1Q9H211 546 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 DZANK1Q9NVP4 752 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 KCND2Q9NZV8 630 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 PARP2Q9UGN5 583 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 MUTYHQ9UIF7 546 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 ADAM28Q9UKQ2 775 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 SCN1AP35498 2009 aa11.65□□□□□ -0.54
SUPT4H1-204ENST00000580947 TSC2P49815 1807 aa11.65□□□□□ -0.55
SUPT4H1-204ENST00000580947 NPHP3-ACAD11A0A0J9YXS1 232 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 VPS37CA5D8V6 355 aaPredicted RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 CCDC169A6NNP5 214 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 SFI1A8K8P3 1242 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 SLC16A4O15374 487 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 TEX28O15482 410 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 KIF4AO95239 1232 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 BMP15O95972 392 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 MAPTP10636 758 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 PLS3P13797 630 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 LIG1P18858 919 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 PDCP20941 246 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 LONP1P36776 959 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 GLUD2P49448 558 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 ZNF131P52739 623 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 ITIH3Q06033 890 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 RAD51AP2Q09MP3 1159 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 HSP90AA2PQ14568 343 aaPredicted RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 ZRSR1Q15695 479 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 TPRNQ4KMQ1 711 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 KIAA1841Q6NSI8 718 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 FUT10Q6P4F1 479 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 FAM173BQ6P4H8 233 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 ALKAL1Q6UXT8 129 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 USP49Q70CQ1 688 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 FBXL18Q96ME1 805 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 ADPGKQ9BRR6 497 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 TARS2Q9BW92 718 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 POMKQ9H5K3 350 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 KMT5AQ9NQR1 393 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 MRPL17Q9NRX2 175 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 FBXO2Q9UK22 296 aaPredicted RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 MTMR6Q9Y217 621 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 RBM19Q9Y4C8 960 aaKnown RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 CLIC4Q9Y696 253 aa11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 MORC2Q9Y6X9 1032 aaPredicted RBP11.64□□□□□ -0.55
SUPT4H1-204ENST00000580947 CASTOR2A6NHX0 329 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 K7ELQ4 463 aaPredicted RBP11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 C2CD2LO14523 706 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 URODP06132 367 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 THP07101 528 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 WEE2P0C1S8 567 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 PLCG1P19174 1290 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 CA8P35219 290 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 GRM5P41594 1212 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 NCKAP1LP55160 1127 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 KARSQ15046 597 aaKnown RBP11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 RARS2Q5T160 578 aaKnown RBP11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 PPFIBP1Q86W92 1011 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 ZBTB45Q96K62 511 aaPredicted RBP11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 RPGRIP1Q96KN7 1286 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 ZMAT2Q96NC0 199 aaKnown RBP11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 FIZ1Q96SL8 496 aa11.63□□□□□ -0.55
SUPT4H1-204ENST00000580947 REEP2Q9BRK0 252 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms