RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 USP20Q9Y2K6 914 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 GIT1Q9Y2X7 761 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 IPPQ9Y573 584 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 ZMYM2Q9UBW7 1377 aa15.56■□□□□ 0.08
SKA2-205ENST00000580541 GOLGA6L19H0YKK7 550 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 ABLIM1O14639 778 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 IKBKBO14920 756 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 SLC16A3O15427 465 aaKnown RBP15.55■□□□□ 0.08
SKA2-205ENST00000580541 MGEA5O60502 916 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 IL18RAPO95256 599 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 EDN1P05305 212 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 KRT13P13646 458 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 TMEM240Q5SV17 173 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 UBXN11Q5T124 520 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 RTN4RL1Q86UN2 441 aaPredicted RBP15.55■□□□□ 0.08
SKA2-205ENST00000580541 CDR2LQ86X02 465 aaPredicted RBP15.55■□□□□ 0.08
SKA2-205ENST00000580541 NPAS4Q8IUM7 802 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 ABI1Q8IZP0 508 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 HERVK_113Q902F9 699 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 FBXL18Q96ME1 805 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 FAM213AQ9BRX8 229 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 SRRTQ9BXP5 876 aaKnown RBP15.55■□□□□ 0.08
SKA2-205ENST00000580541 EIF2AQ9BY44 585 aaKnown RBP15.55■□□□□ 0.08
SKA2-205ENST00000580541 THAP9Q9H5L6 903 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 KANSL3Q9P2N6 904 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 PARP2Q9UGN5 583 aa15.55■□□□□ 0.08
SKA2-205ENST00000580541 TRIM49BA6NDI0 452 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 TPM2P07951 284 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 ENPEPQ07075 957 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 SNRNP35Q16560 246 aaKnown RBP15.54■□□□□ 0.08
SKA2-205ENST00000580541 GLB1LQ6UWU2 654 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 INTS8Q75QN2 995 aaKnown RBP15.54■□□□□ 0.08
SKA2-205ENST00000580541 OTOP2Q7RTS6 562 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 PHOSPHO2Q8TCD6 241 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 FAM200AQ8TCP9 573 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 FNBP1Q96RU3 617 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 ASB7Q9H672 318 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 SNTG2Q9NY99 539 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 CPSF3Q9UKF6 684 aaKnown RBP15.54■□□□□ 0.08
SKA2-205ENST00000580541 SLC4A7Q9Y6M7 1214 aa15.54■□□□□ 0.08
SKA2-205ENST00000580541 TTC3P53804 2025 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 TISP43B9A030 160 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 XPOTO43592 962 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 STX10O60499 249 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 CDK11BP21127 795 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 MAGEA10P43363 369 aaPredicted RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 ACOT2P49753 483 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 PMS1P54277 932 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 OSTNP61366 133 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 PPP2R3AQ06190 1150 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 CCDC40Q4G0X9 1142 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 C11orf57Q6ZUT1 292 aaPredicted RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 C16orf59Q7L2K0 433 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 FRMD5Q7Z6J6 570 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 NT5DC4Q86YG4 428 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 ZC3H3Q8IXZ2 948 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 FAM186BQ8IYM0 893 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 RDH13Q8NBN7 331 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 RNF169Q8NCN4 708 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 URGCPQ8TCY9 931 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 CACTINQ8WUQ7 758 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 TOP1MTQ969P6 601 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 SAAL1Q96ER3 474 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 RPS6KC1Q96S38 1066 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 DUSP9Q99956 384 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 UBE2OQ9C0C9 1292 aaKnown RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 IKZF4Q9H2S9 585 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 RBAKQ9NYW8 714 aaPredicted RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
SKA2-205ENST00000580541 NFE2L3Q9Y4A8 694 aa15.53■□□□□ 0.08
SKA2-205ENST00000580541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.52■□□□□ 0.08
SKA2-205ENST00000580541 GOLGA8IPA6NC78 632 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 GOLGA8JA6NMD2 632 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 AP3M2P53677 418 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 WDR5P61964 334 aaKnown RBP15.52■□□□□ 0.08
SKA2-205ENST00000580541 SPAG1Q07617 926 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 CREBRFQ8IUR6 639 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 SMG8Q8ND04 991 aaKnown RBP15.52■□□□□ 0.08
SKA2-205ENST00000580541 FAM212AQ96EL1 285 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 MFSD14AQ96MC6 490 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 SLC9A7Q96T83 725 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.52■□□□□ 0.08
SKA2-205ENST00000580541 APOL6Q9BWW8 343 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 HAPLN2Q9GZV7 340 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 NXF3Q9H4D5 531 aaKnown RBP15.52■□□□□ 0.08
SKA2-205ENST00000580541 RSAD1Q9HA92 442 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 DERAQ9Y315 318 aa15.52■□□□□ 0.08
SKA2-205ENST00000580541 MICAL3Q7RTP6 2002 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 CARNS1A5YM72 827 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 H0YGN5 161 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 TULP1O00294 542 aaPredicted RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 FAM189A1O60320 539 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 RECQL4O94761 1208 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 IBSPP21815 317 aaPredicted RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 AKAP5P24588 427 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 ZNF598Q86UK7 904 aaKnown RBP15.51■□□□□ 0.07
SKA2-205ENST00000580541 BRSK2Q8IWQ3 736 aa15.51■□□□□ 0.07
SKA2-205ENST00000580541 AOPEPQ8N6M6 819 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms