RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 CEP135Q66GS9 1140 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 TTI2Q6NXR4 508 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 FILIP1Q7Z7B0 1213 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 MRPL10Q7Z7H8 261 aaKnown RBP12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 THNSL1Q8IYQ7 743 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 URGCPQ8TCY9 931 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 FNBP1Q96RU3 617 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 RPS6KC1Q96S38 1066 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 CBWD1Q9BRT8 395 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 FAM213AQ9BRX8 229 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 PCIF1Q9H4Z3 704 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 DMAC2Q9NW81 257 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 RBAKQ9NYW8 714 aaPredicted RBP12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 IPPQ9Y573 584 aa12.79□□□□□ -0.36
SNORD3C-201ENST00000580533 C9IYK1 514 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ABLIM1O14639 778 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 EDN1P05305 212 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ADSSP30520 456 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 AP3M2P53677 418 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 FAM189BP81408 668 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 MLLT1Q03111 559 aaPredicted RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 GPNMBQ14956 572 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 UBXN11Q5T124 520 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 EEF1DP3Q658K8 133 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 SLC39A4Q6P5W5 647 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 GLB1LQ6UWU2 654 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 C11orf57Q6ZUT1 292 aaPredicted RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ECHDC2Q86YB7 292 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 FAM186BQ8IYM0 893 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 RNF169Q8NCN4 708 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 PHOSPHO2Q8TCD6 241 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 HERVK_113Q902F9 699 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ZBTB45Q96K62 511 aaPredicted RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 FBXL18Q96ME1 805 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 SLC9A7Q96T83 725 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 EIF2AQ9BY44 585 aaKnown RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 MRPL9Q9BYD2 267 aaKnown RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ASB7Q9H672 318 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 KANSL3Q9P2N6 904 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 PARP2Q9UGN5 583 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 ARMCX3Q9UH62 379 aaPredicted RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 R3HCC1Q9Y3T6 440 aaKnown RBP12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 NFE2L3Q9Y4A8 694 aa12.78□□□□□ -0.36
SNORD3C-201ENST00000580533 LTBP2Q14767 1821 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 TRIM49BA6NDI0 452 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 TTLL13PA6NNM8 815 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 MGEA5O60502 916 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CAPN15O75808 1086 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CDK11BP21127 795 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 EEF1GP26641 437 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CCDC173Q0VFZ6 552 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 FRMD5Q7Z6J6 570 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CDR2LQ86X02 465 aaPredicted RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 BRSK2Q8IWQ3 736 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 ZC3H3Q8IXZ2 948 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CACTINQ8WUQ7 758 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 SAAL1Q96ER3 474 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 NXF3Q9H4D5 531 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 RSAD1Q9HA92 442 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 SLC38A7Q9NVC3 462 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 SNTG2Q9NY99 539 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 CPSF3Q9UKF6 684 aaKnown RBP12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 DERAQ9Y315 318 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
SNORD3C-201ENST00000580533 TISP43B9A030 160 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 ACRP10323 421 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 ACOT2P49753 483 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 PMS1P54277 932 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 OSTNP61366 133 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 WDR5P61964 334 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 CETN1Q12798 172 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 TMEM240Q5SV17 173 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 LRRC55Q6ZSA7 311 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 SMG8Q8ND04 991 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 TMC2Q8TDI7 906 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 APOL6Q9BWW8 343 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 UBE2OQ9C0C9 1292 aaKnown RBP12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 USP20Q9Y2K6 914 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 C2CD2Q9Y426 696 aa12.76□□□□□ -0.37
SNORD3C-201ENST00000580533 GOLGA8IPA6NC78 632 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 GOLGA8JA6NMD2 632 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 TULP1O00294 542 aaPredicted RBP12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 FAM189A1O60320 539 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 AKAP3O75969 853 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 RECQL4O94761 1208 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 TPM3P06753 285 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 IBSPP21815 317 aaPredicted RBP12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 CYP24A1Q07973 514 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 BFSP1Q12934 665 aa12.75□□□□□ -0.37
SNORD3C-201ENST00000580533 PSMD6Q15008 389 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms