RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 FAM228BP0C875 321 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 RFX1P22670 979 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CASQ1P31415 396 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 GTF2H1P32780 548 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SOX5P35711 763 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PHKA2P46019 1235 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIAA0753Q2KHM9 967 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZNF662Q6ZS27 426 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CDR2LQ86X02 465 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NFKBIZQ9BYH8 718 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 UBE2TQ9NPD8 197 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HTTP42858 3142 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CITO14578 2027 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SMIM10L2AP0DMW4 78 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SMIM10L2BP0DMW5 78 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FERP16591 822 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PROZP22891 400 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TMOD1P28289 359 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PRPF4BQ13523 1007 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SLC18A3Q16572 532 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ATF7IP2Q5U623 682 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 EEF1DP3Q658K8 133 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 C15orf39Q6ZRI6 1047 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FBXL13Q8NEE6 735 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FNBP1Q96RU3 617 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TCHPQ9BT92 498 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 DAAM1Q9Y4D1 1078 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 DUSP10Q9Y6W6 482 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KRT86O43790 486 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MYL3P08590 195 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TNNI1P19237 187 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MAGEA1P43355 309 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FLT3LGP49771 235 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CPT1AP50416 773 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 GPC3P51654 580 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CLDN10P78369 228 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PRKCZQ05513 592 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MCL1Q07820 350 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZNF568Q3ZCX4 644 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MPZL3Q6UWV2 235 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 BRSK2Q8IWQ3 736 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 OLIG1Q8TAK6 271 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MAP7D2Q96T17 732 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.05■□□□□ 0.161e-6■□□□□ 8
CDK5RAP3-218ENST00000580391 ADAMTS1Q9UHI8 967 aa16.05■□□□□ 0.16
CDK5RAP3-218ENST00000580391 OGTO15294 1046 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CYBAP13498 195 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 AKR1A1P14550 325 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MFSD10Q14728 455 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 AMHR2Q16671 573 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TMEM132AQ24JP5 1023 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TDRD10Q5VZ19 366 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TSHZ1Q6ZSZ6 1077 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 IFNLR1Q8IU57 520 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PPM1KQ8N3J5 372 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CEP120Q8N960 986 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CGRRF1Q99675 332 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 L2HGDHQ9H9P8 463 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PTPRHQ9HD43 1115 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PRMT7Q9NVM4 692 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 BZW2Q9Y6E2 419 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TRIP11Q15643 1979 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SCN10AQ9Y5Y9 1956 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MYADML2A6NDP7 307 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 URI1O94763 535 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PSEN2P49810 448 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 POU5F1BQ06416 359 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HIC1Q14526 733 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 DEFB115Q30KQ5 88 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NFRKBQ6P4R8 1299 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIAA0319LQ8IZA0 1049 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NLRP7Q8WX94 980 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PI4K2AQ9BTU6 479 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CDT1Q9H211 546 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MYO1AQ9UBC5 1043 aa16.04■□□□□ 0.16
CDK5RAP3-218ENST00000580391 RRN3P2A6NIE6 340 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HAS3O00219 553 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FOXN3O00409 490 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TRIM32Q13049 653 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FSCN1Q16658 493 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZACNQ401N2 412 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 OR5B17Q8NGF7 314 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HELQQ8TDG4 1101 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SCLT1Q96NL6 688 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TSGA10Q9BZW7 698 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FAM49AQ9H0Q0 323 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 Q9Y3F1 56 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NRCAMQ92823 1304 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 DNAH12Q6ZR08 3092 aa16.03■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PJA2O43164 708 aa16.02■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZEB2O60315 1214 aa16.02■□□□□ 0.16
CDK5RAP3-218ENST00000580391 HLA-DRAP01903 254 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms