RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 KRBOX4Q5JUW0 171 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 FKBP15Q5T1M5 1219 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 CCDC183Q5T5S1 534 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 SLC6A19Q695T7 634 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 SLC30A6Q6NXT4 461 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 POMZP3Q6PJE2 187 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 LHFPL2Q6ZUX7 228 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 B4GALNT4Q76KP1 1039 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 LPCAT2Q7L5N7 544 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 GALNT7Q86SF2 657 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 RSPH3Q86UC2 560 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 AHI1Q8N157 1196 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PCSK9Q8NBP7 692 aaKnown RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 ST13P5Q8NFI4 369 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 ERMNQ8TAM6 284 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 NOC3LQ8WTT2 800 aaKnown RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 CCDC43Q96MW1 224 aaKnown RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 PLEKHG4BQ96PX9 1271 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PIGSQ96S52 555 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 NT5C1AQ9BXI3 368 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 C2orf40Q9H1Z8 148 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PLSCR4Q9NRQ2 329 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 C1orf112Q9NSG2 853 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 FNIP2Q9P278 1114 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 IFT80Q9P2H3 777 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 HECAQ9UBI9 543 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 MOSPD1Q9UJG1 213 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 C19orf53Q9UNZ5 99 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 CARD8Q9Y2G2 431 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 GIT1Q9Y2X7 761 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 EVC2Q86UK5 1308 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 CYP2D7A0A087X1C5 515 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 B8ZZF3 427 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 ETV2O00321 342 aaPredicted RBP7.13□□□□□ -1.27
COPS3-216ENST00000579716 CETN3O15182 167 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 CEP104O60308 925 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 OPN1MWP04001 364 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 OPN1MW2P0DN77 364 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 OPN1MW3P0DN78 364 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 EIF4A3P38919 411 aaKnown RBP7.13□□□□□ -1.27
COPS3-216ENST00000579716 TUBA1BP68363 451 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 HNRNPUQ00839 825 aaKnown RBP eCLIP7.13□□□□□ -1.27
COPS3-216ENST00000579716 CBX2Q14781 532 aaPredicted RBP7.13□□□□□ -1.27
COPS3-216ENST00000579716 RCN1Q15293 331 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 LONRF2Q1L5Z9 754 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 MMEL1Q495T6 779 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 CEP55Q53EZ4 464 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 SFMBT2Q5VUG0 894 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 FAM205BPQ63HN1 556 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 LIN54Q6MZP7 749 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TUBA1AQ71U36 451 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 PDZD4Q76G19 769 aaPredicted RBP7.13□□□□□ -1.27
COPS3-216ENST00000579716 LRRTM3Q86VH5 581 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 PPM1KQ8N3J5 372 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 MFSD4AQ8N468 514 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 CAMKK1Q8N5S9 505 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TRIML2Q8N7C3 387 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TOR1AIP2Q8NFQ8 470 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 DEPTORQ8TB45 409 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 ZNF507Q8TCN5 953 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 FATE1Q969F0 183 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 HPS3Q969F9 1004 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 GIMAP5Q96F15 307 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TUBA1CQ9BQE3 449 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 CRACR2AQ9BSW2 395 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 DHRS4Q9BTZ2 278 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TTLL2Q9BWV7 592 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 NT5C3AQ9H0P0 336 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 MCM9Q9NXL9 1143 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 RAPGEFL1Q9UHV5 662 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 RASAL2Q9UJF2 1139 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 TMED5Q9Y3A6 229 aa7.13□□□□□ -1.27
COPS3-216ENST00000579716 GAKO14976 1311 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 A0A0G2JPF8 293 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 HNRNPCL3B7ZW38 293 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 PI4K2BG5E9Z4 385 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CAPN9O14815 690 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 EPN2O95208 641 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CELA3AP09093 270 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 HNRNPCL4P0DMR1 293 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ATP5OP48047 213 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 TNFAIP2Q03169 654 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 KLHL30Q0D2K2 578 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 GRSF1Q12849 480 aaKnown RBP eCLIP7.12□□□□□ -1.27
COPS3-216ENST00000579716 DCAF17Q5H9S7 520 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 SFRP5Q5T4F7 317 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 KAZNQ674X7 775 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 RAB12Q6IQ22 244 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ATG14Q6ZNE5 492 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 IKBIPQ70UQ0 350 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 CHST15Q7LFX5 561 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 NUP93Q8N1F7 819 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 AVL9Q8NBF6 648 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ZNF296Q8WUU4 475 aaPredicted RBP7.12□□□□□ -1.27
COPS3-216ENST00000579716 SHC3Q92529 594 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 SGCDQ92629 289 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 UBE2FQ969M7 185 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 PLPPR2Q96GM1 343 aa7.12□□□□□ -1.27
COPS3-216ENST00000579716 ZNF845Q96IR2 970 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms