RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 GLIS3Q8NEA6 775 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 ATL2Q8NHH9 583 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SMARCC2Q8TAQ2 1214 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 ZCCHC14Q8WYQ9 949 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 GJA10Q969M2 543 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CDHR1Q96JP9 859 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SENP7Q9BQF6 1050 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SMOC2Q9H3U7 446 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 WDR6Q9NNW5 1121 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 RIC8AQ9NPQ8 531 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 SETD4Q9NVD3 440 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 CACNA2D2Q9NY47 1150 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 TUBE1Q9UJT0 475 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 DCTN4Q9UJW0 460 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PCDHA6Q9UN73 950 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 G3BP2Q9UN86 482 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 TMA7Q9Y2S6 64 aaKnown RBP3.8□□□□□ -1.8
CDH19-204ENST00000579658 PCDHGA5Q9Y5G8 931 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 PCDHA8Q9Y5H6 950 aa3.8□□□□□ -1.8
CDH19-204ENST00000579658 C2orf16Q68DN1 1984 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CACNA1GO43497 2377 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 DENND3A2RUS2 1198 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 M0R2N6 131 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 MAN2B1O00754 1011 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TM4SF5O14894 197 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 FIBPO43427 364 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 ATP9AO75110 1047 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 AKAP3O75969 853 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 KCNK5O95279 499 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 DEXIO95424 95 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 DCNP07585 359 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 POU2F2P09086 479 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CTSAP10619 480 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 SP100P23497 879 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 CD52P31358 61 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 RDXP35241 583 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 ADCY7P51828 1080 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 NLRP5P59047 1200 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 AKAP17AQ02040 695 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 SP2Q02086 613 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CREMQ03060 361 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 RING1Q06587 406 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 SPEM2Q0P670 501 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 NR1H3Q13133 447 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 NR5A1Q13285 461 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 PTPN14Q15678 1187 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 UVSSAQ2YD98 709 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 HSDL1Q3SXM5 330 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 AASDHQ4L235 1098 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 SPECC1Q5M775 1068 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 PRR23BQ6ZRT6 265 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 DDX53Q86TM3 631 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 VSIG10LQ86VR7 867 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 ABI1Q8IZP0 508 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 C12orf50Q8NA57 414 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 LSM14AQ8ND56 463 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 DNASE1L2Q92874 299 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TMEM169Q96HH4 297 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 MYADMQ96S97 322 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 APOL5Q9BWW9 433 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 LSM14BQ9BX40 385 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 CELF4Q9BZC1 486 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 ZMYND12Q9H0C1 365 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 ZBP1Q9H171 429 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TMEM134Q9H6X4 195 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TYW1Q9NV66 732 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 ERAP1Q9NZ08 941 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CCDC39Q9UFE4 941 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 EGFL7Q9UHF1 273 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 PADI3Q9ULW8 664 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 PCDHA2Q9Y5H9 948 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 SMIM35A0A1B0GVV1 85 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 SYCE3A1L190 88 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 HIDE1A8MVS5 230 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 BTBD18B2RXH4 712 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 C9IYK1 514 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 H0Y626 953 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CSPG5O95196 566 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TRIM16O95361 564 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CXCL14O95715 111 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 COL1A2P08123 1366 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 TPRP12270 2363 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 ITGB5P18084 799 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CSRP1P21291 193 aaKnown RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 HOXA6P31267 233 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 GBP2P32456 591 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 GCGRP47871 477 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 HTR4Q13639 388 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 FRMPD4Q14CM0 1322 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 GRIK4Q16099 956 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 ZNF746Q6NUN9 644 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 TREML4Q6UXN2 200 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 NUDT18Q6ZVK8 323 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 ARMCX6Q7L4S7 300 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 RTN4RL1Q86UN2 441 aaPredicted RBP3.79□□□□□ -1.8
CDH19-204ENST00000579658 TRIM22Q8IYM9 498 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 FAM184AQ8NB25 1140 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 GPR152Q8TDT2 470 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 GATA6Q92908 595 aa3.79□□□□□ -1.8
CDH19-204ENST00000579658 CUL5Q93034 780 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms