RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 RAD51AP2Q09MP3 1159 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 TUSC3Q13454 348 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 KIAA0319Q5VV43 1072 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 LRRC15Q8TF66 581 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 PHF7Q9BWX1 381 aaPredicted RBP25.24■■□□□ 1.63
VAPA-205ENST00000578314 EMILIN2Q9BXX0 1053 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 BLOC1S4Q9NUP1 217 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 SSX2IPQ9Y2D8 614 aa25.24■■□□□ 1.63
VAPA-205ENST00000578314 LOC730098B7Z3J9 87 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 SLC16A4O15374 487 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 DCXO43602 365 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 THP07101 528 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 CNPP09543 421 aaKnown RBP25.23■■□□□ 1.63
VAPA-205ENST00000578314 SMTNP53814 917 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 NAB2Q15742 525 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 FAM173BQ6P4H8 233 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 TMEM161BQ8NDZ6 487 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 TARS2Q9BW92 718 aaKnown RBP25.23■■□□□ 1.63
VAPA-205ENST00000578314 CCSER1Q9C0I3 900 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 CXCL16Q9H2A7 254 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 ADAM7Q9H2U9 754 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 CHST7Q9NS84 486 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 FOXD4L1Q9NU39 408 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 DZANK1Q9NVP4 752 aa25.23■■□□□ 1.63
VAPA-205ENST00000578314 NPHP3-ACAD11A0A0J9YXS1 232 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 STX6O43752 255 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 URODP06132 367 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 PROZP22891 400 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 ITIH3Q06033 890 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 CBX2Q14781 532 aaPredicted RBP25.22■■□□□ 1.63
VAPA-205ENST00000578314 KARSQ15046 597 aaKnown RBP25.22■■□□□ 1.63
VAPA-205ENST00000578314 KCNN1Q92952 543 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 ZSCAN16Q9H4T2 348 aaPredicted RBP25.22■■□□□ 1.63
VAPA-205ENST00000578314 ADAM28Q9UKQ2 775 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 ODF2LQ9ULJ1 636 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 GDAQ9Y2T3 454 aa25.22■■□□□ 1.63
VAPA-205ENST00000578314 SRPRBQ9Y5M8 271 aaKnown RBP25.22■■□□□ 1.63
VAPA-205ENST00000578314 MORC2Q9Y6X9 1032 aaPredicted RBP25.22■■□□□ 1.63
VAPA-205ENST00000578314 BRD1O95696 1058 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 MAPTP10636 758 aaKnown RBP25.21■■□□□ 1.63
VAPA-205ENST00000578314 EPCAMP16422 314 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 PLCG1P19174 1290 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 KLRC2P26717 231 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 GRM5P41594 1212 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 GLUD2P49448 558 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 DSG1Q02413 1049 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 HSP90AA2PQ14568 343 aaPredicted RBP25.21■■□□□ 1.63
VAPA-205ENST00000578314 FUT10Q6P4F1 479 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 GPR65Q8IYL9 337 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 RAD54LQ92698 747 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 APOL5Q9BWW9 433 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 GPR62Q9BZJ7 368 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 CDT1Q9H211 546 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 RXFP1Q9HBX9 757 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 LARSQ9P2J5 1176 aaKnown RBP25.21■■□□□ 1.63
VAPA-205ENST00000578314 FBXO2Q9UK22 296 aaPredicted RBP25.21■■□□□ 1.63
VAPA-205ENST00000578314 HCN4Q9Y3Q4 1203 aa25.21■■□□□ 1.63
VAPA-205ENST00000578314 PRR33A8MZF0 331 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 ABLIM1O14639 778 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 TADA2AO75478 443 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 MCF2P10911 925 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 MARCKSP29966 332 aaPredicted RBP25.2■■□□□ 1.62
VAPA-205ENST00000578314 DDIT3P35638 169 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 CLCN4P51793 760 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 GPBP1Q86WP2 473 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 RABGGTAQ92696 567 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 PAAF1Q9BRP4 392 aa25.2■■□□□ 1.62
VAPA-205ENST00000578314 C2CD2LO14523 706 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 NCKAP1LP55160 1127 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 CACNB1Q02641 598 aaPredicted RBP25.19■■□□□ 1.62
VAPA-205ENST00000578314 STRN3Q13033 797 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 MCM6Q14566 821 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 USP41Q3LFD5 358 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 ZNF568Q3ZCX4 644 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 XKR4Q5GH76 650 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 CES5AQ6NT32 575 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 ALKAL1Q6UXT8 129 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 USP49Q70CQ1 688 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 RNF135Q8IUD6 432 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 RASSF8Q8NHQ8 419 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 EPSTI1Q96J88 318 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 PPP1R10Q96QC0 940 aaKnown RBP25.19■■□□□ 1.62
VAPA-205ENST00000578314 REEP2Q9BRK0 252 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 CACNG4Q9UBN1 327 aa25.19■■□□□ 1.62
VAPA-205ENST00000578314 CASTOR2A6NHX0 329 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 H0YCG3 227 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 ZNF131P52739 623 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 SLC39A14Q15043 492 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 KIAA1841Q6NSI8 718 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 MPZL3Q6UWV2 235 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 ZPBP2Q6X784 338 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 C12orf76Q8N812 135 aaPredicted RBP25.18■■□□□ 1.62
VAPA-205ENST00000578314 CEP120Q8N960 986 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 FBXL18Q96ME1 805 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 NECTIN4Q96NY8 510 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 TCHPQ9BT92 498 aa25.18■■□□□ 1.62
VAPA-205ENST00000578314 CCDC94Q9BW85 323 aaPredicted RBP25.18■■□□□ 1.62
VAPA-205ENST00000578314 ARIH1Q9Y4X5 557 aaPredicted RBP25.18■■□□□ 1.62
VAPA-205ENST00000578314 TEX28O15482 410 aa25.17■■□□□ 1.62
VAPA-205ENST00000578314 TOM1L1O75674 476 aa25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms