RNA–Protein interactions for RNA: ENST00000578252.1

TRAPPC8-204, Transcript of trafficking protein particle complex 8, humanhuman

TSL 3

Gene TRAPPC8, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-204ENST00000578252 DNAJC25Q9H1X3 360 aa12.23□□□□□ -0.45
TRAPPC8-204ENST00000578252 PDZD7Q9H5P4 517 aa12.23□□□□□ -0.45
TRAPPC8-204ENST00000578252 AGO3Q9H9G7 860 aaKnown RBP12.23□□□□□ -0.45
TRAPPC8-204ENST00000578252 A0A0B4J269 797 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 SMTNL1A8MU46 457 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 NBNO60934 754 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 EFCAB14O75071 495 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 EDN1P05305 212 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 HOXA11P31270 313 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 MATR3P43243 847 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 ZNF165P49910 485 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 RAB27AP51159 221 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 FKBP3Q00688 224 aaKnown RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 MYL5Q02045 173 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 KCNC4Q03721 635 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 NOLC1Q14978 699 aaKnown RBP eCLIP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 TPD52L1Q16890 204 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 TTI2Q6NXR4 508 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 SLC39A4Q6P5W5 647 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 CNKSR3Q6P9H4 555 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 C11orf57Q6ZUT1 292 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 HACE1Q8IYU2 909 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 ENOX1Q8TC92 643 aaKnown RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 NOC3LQ8WTT2 800 aaKnown RBP12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 POMGNT1Q8WZA1 660 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 CPB2Q96IY4 423 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 SEMA6BQ9H3T3 888 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 KIAA1586Q9HCI6 787 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 PTPRHQ9HD43 1115 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 C1orf112Q9NSG2 853 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 ANKFY1Q9P2R3 1169 aa12.22□□□□□ -0.45
TRAPPC8-204ENST00000578252 ANKRD63C9JTQ0 380 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 IKBKBO14920 756 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 CETN3O15182 167 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 OGTO15294 1046 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 NR3C1P04150 777 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 ACTN1P12814 892 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 NR2F2P24468 414 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 POU5F1Q01860 360 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 FPGSQ05932 587 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 DSC3Q14574 896 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 GPNMBQ14956 572 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 SPATA1Q5VX52 437 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 ANKRD40Q6AI12 368 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 TWF2Q6IBS0 349 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 ZC3H3Q8IXZ2 948 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 FAM200AQ8TCP9 573 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 CEP63Q96MT8 703 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 MSTO1Q9BUK6 570 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 CDT1Q9H211 546 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 IL23AQ9NPF7 189 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 AGO2Q9UKV8 859 aaKnown RBP12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 FRMD4BQ9Y2L6 1034 aa12.21□□□□□ -0.45
TRAPPC8-204ENST00000578252 MICAL3Q7RTP6 2002 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 BECN2A8MW95 431 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 ABLIM1O14639 778 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 MAPK13O15264 365 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 SLC16A3O15427 465 aaKnown RBP12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 EXTL3O43909 919 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 GNA14O95837 355 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 CSF2RAP15509 400 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 ADSSP30520 456 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 STX17P56962 302 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 TPM4P67936 248 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 ADAM9Q13443 819 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 IKBKEQ14164 716 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 EEF1DP3Q658K8 133 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 DEFB128Q7Z7B8 93 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 FAM114A1Q8IWE2 563 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 GPD1LQ8N335 351 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 CSGALNACT2Q8N6G5 542 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 LBHD1Q9BQE6 289 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 CBWD1Q9BRT8 395 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 MKNK1Q9BUB5 465 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 CCDC94Q9BW85 323 aaPredicted RBP12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 OSBPL7Q9BZF2 842 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 TMX1Q9H3N1 280 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 RGS18Q9NS28 235 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 DMAC2Q9NW81 257 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 HSPBP1Q9NZL4 362 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 USP20Q9Y2K6 914 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 RALGAPA2Q2PPJ7 1873 aa12.2□□□□□ -0.46
TRAPPC8-204ENST00000578252 ABHD14A-ACY1A0A1B0GW23 586 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 TRIM49BA6NDI0 452 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 TISP43B9A030 160 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 CLIC2O15247 247 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 EXOC3O60645 756 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 ZNF623O75123 536 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 BAIAP3O94812 1187 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 NPTXRO95502 500 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 CLTAP09496 248 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 DNAJB2P25686 324 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 ITGB8P26012 769 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 PSMC2P35998 433 aaKnown RBP12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 GRM5P41594 1212 aa12.19□□□□□ -0.46
TRAPPC8-204ENST00000578252 CYP2J2P51589 502 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms