RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 RECQL4O94761 1208 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 PRPF6O94906 941 aaKnown RBP10.44□□□□□ -0.74
CCDC40-214ENST00000575431 ALDH2P05091 517 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 MYBP10242 640 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 POU3F3P20264 500 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-214ENST00000575431 AKAP5P24588 427 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 CASP1P29466 404 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 CTNNB1P35222 781 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 MLH1P40692 756 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 GATMP50440 423 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 CASP5P51878 434 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 UBE3AQ05086 875 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 KCNT2Q6UVM3 1135 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 HS2ST1Q7LGA3 356 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 THNSL1Q8IYQ7 743 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 GOLGA5Q8TBA6 731 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 SCFD1Q8WVM8 642 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 ARNTL2Q8WYA1 636 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 POMGNT1Q8WZA1 660 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 SMARCE1Q969G3 411 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 ZBTB45Q96K62 511 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-214ENST00000575431 ZNF558Q96NG5 402 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 GAS2L1Q99501 681 aaPredicted RBP10.44□□□□□ -0.74
CCDC40-214ENST00000575431 C17orf80Q9BSJ5 609 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 MSTO1Q9BUK6 570 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 GBP3Q9H0R5 595 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 RNF39Q9H2S5 420 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 CWH43Q9H720 699 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 KIAA1586Q9HCI6 787 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 SLC39A2Q9NP94 309 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 SLC38A7Q9NVC3 462 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 MTMR10Q9NXD2 777 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 SNTG2Q9NY99 539 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 NLRC5Q86WI3 1866 aa10.44□□□□□ -0.74
CCDC40-214ENST00000575431 ANKRD63C9JTQ0 380 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 THP07101 528 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 LINC00271P0C7V0 271 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 HARSP12081 509 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 KCNE1P15382 129 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 PPP1R2P41236 205 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 PLCB3Q01970 1234 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 KRT17Q04695 432 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 DSC1Q08554 894 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 STK4Q13043 487 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 GPM6BQ13491 265 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 GRIN2CQ14957 1233 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 PTPROQ16827 1216 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 KNOP1Q1ED39 458 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 XKR4Q5GH76 650 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 LRRC55Q6ZSA7 311 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 COLGALT1Q8NBJ5 622 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 GSTCDQ8NEC7 633 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 SPATA20Q8TB22 786 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 ASB7Q9H672 318 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 NRDE2Q9H7Z3 1164 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 RPF1Q9H9Y2 349 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 SPG21Q9NZD8 308 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 KLK14Q9P0G3 267 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 PUF60Q9UHX1 559 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 AGO2Q9UKV8 859 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 LZTS1Q9Y250 596 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 GDAQ9Y2T3 454 aa10.43□□□□□ -0.74
CCDC40-214ENST00000575431 TDRD15B5MCY1 1934 aaKnown RBP10.43□□□□□ -0.74
CCDC40-214ENST00000575431 SMIM28A0A1B0GU29 152 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 RBAK-RBAKDNI3L0D1 243 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 XPOTO43592 962 aaKnown RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ARHGEF15O94989 841 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 POMCP01189 267 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ADRB2P07550 413 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 PRR29P0C7W0 189 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 SCNN1GP51170 649 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 BCAR1P56945 870 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 OSTNP61366 133 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 PPP2R3AQ06190 1150 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 KCNA1Q09470 495 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 TUSC3Q13454 348 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 PNOCQ13519 176 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 MYBPC2Q14324 1141 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 BMS1Q14692 1282 aaKnown RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ZNF658Q5TYW1 1059 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 PDE12Q6L8Q7 609 aaKnown RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 SLC39A4Q6P5W5 647 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ALKAL1Q6UXT8 129 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 C12orf56Q8IXR9 622 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 COLGALT2Q8IYK4 626 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 GUF1Q8N442 669 aaKnown RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 CEP120Q8N960 986 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 KIAA0895Q8NCT3 520 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 TMEM174Q8WUU8 243 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 DDX27Q96GQ7 796 aaKnown RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 TMEM169Q96HH4 297 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 SNX27Q96L92 541 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 ZFP42Q96MM3 310 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 FAM161BQ96MY7 647 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 UROC1Q96N76 676 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 CDX2Q99626 313 aaPredicted RBP10.42□□□□□ -0.74
CCDC40-214ENST00000575431 COLEC11Q9BWP8 271 aa10.42□□□□□ -0.74
CCDC40-214ENST00000575431 FGFBP2Q9BYJ0 223 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 137.9 ms