RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PSMD6Q15008 389 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 TRIM50Q86XT4 487 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 FBXO16Q8IX29 292 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 ACTRT1Q8TDG2 376 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 TATDN2Q93075 761 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 HES6Q96HZ4 224 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 GPR20Q99678 358 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 MSTO1Q9BUK6 570 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 C1orf112Q9NSG2 853 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 DNAJC25-GNG10A0A024R161 153 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 PGRMC1O00264 195 aaKnown RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 MMEP08473 750 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 CYP11B1P15538 503 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 CHRNB2P17787 502 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 TNNC1P63316 161 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 DRP2Q13474 957 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 CELF3Q5SZQ8 465 aaKnown RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 GPAT2Q6NUI2 795 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 BBXQ8WY36 941 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 ZNF516Q92618 1163 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 DHX38Q92620 1227 aaKnown RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 PCDHB18PQ96TA0 734 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 HAPLN2Q9GZV7 340 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 MROH8Q9H579 483 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 RBAKQ9NYW8 714 aaPredicted RBP15.13■□□□□ 0.01
VPS33B-208ENST00000574755 CTTNBP2NLQ9P2B4 639 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 COG5Q9UP83 839 aa15.13■□□□□ 0.01
VPS33B-208ENST00000574755 ADCY3O60266 1144 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 LDHAP00338 332 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 KRT5P13647 590 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 ERVK-9P63128 1117 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 GPC5P78333 572 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 CLDN10P78369 228 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 GCNT1Q02742 428 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 BIRC3Q13489 604 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 C15orf39Q6ZRI6 1047 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 DHX37Q8IY37 1157 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 AENQ8WTP8 325 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 PRPF31Q8WWY3 499 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 CCDC102AQ96A19 550 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 TMEM134Q9H6X4 195 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 VIPAS39Q9H9C1 493 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 NOC2LQ9Y3T9 749 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 HEXIM1O94992 359 aaKnown RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 EDN1P05305 212 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 ZBTB48P10074 688 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 GZMAP12544 262 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 WNT7BP56706 349 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 FMO1Q01740 532 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 SNAPC2Q13487 334 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 HSP90B2PQ58FF3 399 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 CRELD2Q6UXH1 353 aaPredicted RBP15.12■□□□□ 0.01
VPS33B-208ENST00000574755 ENOSF1Q7L5Y1 443 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 KLHL7Q8IXQ5 586 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 SPATA33Q96N06 139 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.013e-6■■■□□ 18.7
VPS33B-208ENST00000574755 PLEKHA4Q9H4M7 779 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 TMEM59LQ9UK28 342 aa15.12■□□□□ 0.01
VPS33B-208ENST00000574755 A0A0B4J269 797 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 GLI1P08151 1106 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 CYP2C8P10632 490 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
VPS33B-208ENST00000574755 GJA5P36382 358 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 PIK3CAP42336 1068 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 CDR2Q01850 454 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 ZACNQ401N2 412 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 WDR44Q5JSH3 913 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 IFT20Q8IY31 132 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 AP1M1Q9BXS5 423 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 EPHB4P54760 987 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 HADHBP55084 474 aaKnown RBP15.11■□□□□ 0.01
VPS33B-208ENST00000574755 GUCY2DQ02846 1103 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 ZBTB41Q5SVQ8 909 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 TDRD10Q5VZ19 366 aaKnown RBP15.11■□□□□ 0.01
VPS33B-208ENST00000574755 SLC10A4Q96EP9 437 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 CALR3Q96L12 384 aaKnown RBP15.11■□□□□ 0.01
VPS33B-208ENST00000574755 FAM81BQ96LP2 452 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 EPB41L5Q9HCM4 733 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 HPCAL4Q9UM19 191 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 PPME1Q9Y570 386 aa15.11■□□□□ 0.01
VPS33B-208ENST00000574755 PTPRJQ12913 1337 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 CLDN3O15551 220 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 HLA-DRAP01903 254 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 C4BPAP04003 597 aaKnown RBP15.1■□□□□ 0.01
VPS33B-208ENST00000574755 TXNP10599 105 aaKnown RBP15.1■□□□□ 0.01
VPS33B-208ENST00000574755 TNFRSF8P28908 595 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 EFNA5P52803 228 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 DMTNQ08495 405 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 IER5Q5VY09 327 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 SND1Q7KZF4 910 aaKnown RBP eCLIP15.1■□□□□ 0.01
VPS33B-208ENST00000574755 PLPPR4Q7Z2D5 763 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 RASGEF1CQ8N431 466 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 LRRC71Q8N4P6 559 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 ATP8B4Q8TF62 1192 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 SCFD2Q8WU76 684 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 TCP11Q8WWU5 503 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 COPS5Q92905 334 aa15.1■□□□□ 0.01
VPS33B-208ENST00000574755 TAF1DQ9H5J8 278 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms