RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ELMO3Q96BJ8 720 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 PRMT6Q96LA8 375 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 RIT2Q99578 217 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 ROPN1BQ9BZX4 212 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 ROPN1Q9HAT0 212 aaPredicted RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 ARHGEF10LQ9HCE6 1279 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 GTF3C4Q9UKN8 822 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 ZHX2Q9Y6X8 837 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 ZNFX1Q9P2E3 1918 aaKnown RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 MAPTP10636 758 aaKnown RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 PLS3P13797 630 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 SNX1Q13596 522 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 NEDD9Q14511 834 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 E2F5Q15329 346 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 TRMT10CQ7L0Y3 403 aaKnown RBP20.43■□□□□ 0.86
SCARF1-206ENST00000573852 HAUS6Q7Z4H7 955 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 TEX2Q8IWB9 1127 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 MGARPQ8TDB4 240 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 USP20Q9Y2K6 914 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
SCARF1-206ENST00000573852 FOXO6A8MYZ6 492 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 SNX3O60493 162 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 CYP11B1P15538 503 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 CHKAP35790 457 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 RARRES1P49788 294 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 KRT17Q04695 432 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 ALCAMQ13740 583 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 SLC27A3Q5K4L6 730 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 CCDC63Q8NA47 563 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-206ENST00000573852 SYNPO2Q9UMS6 1093 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 AGAP1Q9UPQ3 857 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 TMEM150BA6NC51 233 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 ATP6V1G2O95670 118 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 P4HBP07237 508 aaKnown RBP20.42■□□□□ 0.86
SCARF1-206ENST00000573852 AFF2P51816 1311 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 ZYXQ15942 572 aaKnown RBP20.42■□□□□ 0.86
SCARF1-206ENST00000573852 CBWD2Q8IUF1 395 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 KCNH7Q9NS40 1196 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 GGT7Q9UJ14 662 aa20.42■□□□□ 0.86
SCARF1-206ENST00000573852 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-206ENST00000573852 COL11A2P13942 1736 aaPredicted RBP20.42■□□□□ 0.86
SCARF1-206ENST00000573852 FSCN2O14926 492 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 TOM1O60784 492 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 MFAP3P55082 362 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 GTF2BQ00403 316 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 SGO2Q562F6 1265 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 ARHGEF2Q92974 986 aaKnown RBP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 NSRP1Q9H0G5 558 aaKnown RBP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 GPRC5CQ9NQ84 441 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 FBXO28Q9NVF7 368 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 UVRAGQ9P2Y5 699 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 ZBTB21Q9ULJ3 1066 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 SLC16A4O15374 487 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 DHX15O43143 795 aaKnown RBP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 OAS1P00973 400 aaKnown RBP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 CDR2Q01850 454 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 RHBDF2Q6PJF5 856 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 VSTM1Q6UX27 236 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 RPAINQ86UA6 219 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 SEPT12Q8IYM1 358 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 ZNF622Q969S3 477 aaKnown RBP eCLIP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 CCDC127Q96BQ5 260 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 MASTLQ96GX5 879 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 NOD2Q9HC29 1040 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 CHST7Q9NS84 486 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 HOMER3Q9NSC5 361 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 WHRNQ9P202 907 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 CTNNAL1Q9UBT7 734 aa20.41■□□□□ 0.86
SCARF1-206ENST00000573852 ZNF646O15015 1829 aaPredicted RBP20.41■□□□□ 0.86
SCARF1-206ENST00000573852 TMEM120BA0PK00 339 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 PMM2O15305 246 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 CALCAP01258 141 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 PDE6CP51160 858 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 NBPF9Q3BBW0 867 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TRMT1LQ7Z2T5 733 aaKnown RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TBC1D1Q86TI0 1168 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 IL31RAQ8NI17 732 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 HELQQ8TDG4 1101 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 CHURC1Q8WUH1 139 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TCP11Q8WWU5 503 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 ATG4AQ8WYN0 398 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 SLCO2A1Q92959 643 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 DNAJC17Q9NVM6 304 aaKnown RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 BAIAP2L1Q9UHR4 511 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 TCP11X1B4DZS4 312 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 MAPK13O15264 365 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 GIMAP7Q8NHV1 300 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 DYDC1Q8WWB3 177 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 DDX1Q92499 740 aaKnown RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 DHX38Q92620 1227 aaKnown RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 HERPUD2Q9BSE4 406 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 FGFR1OP2Q9NVK5 253 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 COL20A1Q9P218 1284 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
SCARF1-206ENST00000573852 ASIC3Q9UHC3 531 aa20.4■□□□□ 0.86
SCARF1-206ENST00000573852 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms