RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TUSC3Q13454 348 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 DCAF4L1Q3SXM0 396 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 FUT10Q6P4F1 479 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 PPFIBP1Q86W92 1011 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 GPR65Q8IYL9 337 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 CEP120Q8N960 986 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 SPIRE2Q8WWL2 714 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 KCNN1Q92952 543 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 B3GALT6Q96L58 329 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 FBXL18Q96ME1 805 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 PLIN2Q99541 437 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 C17orf75Q9HAS0 396 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 ADAM28Q9UKQ2 775 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 TRIP11Q15643 1979 aa19.18■□□□□ 0.66
SMG6-214ENST00000573827 MYO10Q9HD67 2058 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 SFI1A8K8P3 1242 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 K7ERI5 159 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 SLC26A4O43511 780 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 BRD1O95696 1058 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 URODP06132 367 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 PLA2G4BP0C869 781 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 CA8P35219 290 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 GLUD2P49448 558 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 DMP1Q13316 513 aaPredicted RBP19.17■□□□□ 0.66
SMG6-214ENST00000573827 HSP90AA2PQ14568 343 aaPredicted RBP19.17■□□□□ 0.66
SMG6-214ENST00000573827 PTPAQ15257 358 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 XKR4Q5GH76 650 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 RARS2Q5T160 578 aaKnown RBP19.17■□□□□ 0.66
SMG6-214ENST00000573827 KIAA1841Q6NSI8 718 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 CD300LGQ6UXG3 332 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 ALKAL1Q6UXT8 129 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 TMEM161BQ8NDZ6 487 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 EDAQ92838 391 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 AK8Q96MA6 479 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 DRC1Q96MC2 740 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 NECTIN4Q96NY8 510 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 PPP1R10Q96QC0 940 aaKnown RBP19.17■□□□□ 0.66
SMG6-214ENST00000573827 TIPINQ9BVW5 301 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 COLEC11Q9BWP8 271 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 EMILIN2Q9BXX0 1053 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 NT5C3AQ9H0P0 336 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 CDT1Q9H211 546 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 BLOC1S4Q9NUP1 217 aa19.17■□□□□ 0.66
SMG6-214ENST00000573827 DAXXQ9UER7 740 aaPredicted RBP19.17■□□□□ 0.66
SMG6-214ENST00000573827 PLXNA3P51805 1871 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 DENND4AQ7Z401 1863 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 CCDC169A6NNP5 214 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 C2CD2LO14523 706 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 KIF4AO95239 1232 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 RESTQ13127 1097 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 SF3A1Q15459 793 aaKnown RBP19.16■□□□□ 0.66
SMG6-214ENST00000573827 ZRSR1Q15695 479 aaKnown RBP19.16■□□□□ 0.66
SMG6-214ENST00000573827 GPR149Q86SP6 731 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 CABP7Q86V35 215 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 ADPGKQ9BRR6 497 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 TARS2Q9BW92 718 aaKnown RBP19.16■□□□□ 0.66
SMG6-214ENST00000573827 GDAQ9Y2T3 454 aa19.16■□□□□ 0.66
SMG6-214ENST00000573827 NPHP3-ACAD11A0A0J9YXS1 232 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 CASTOR2A6NHX0 329 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 SLC16A4O15374 487 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 MAPTP10636 758 aaKnown RBP19.15■□□□□ 0.66
SMG6-214ENST00000573827 PLS3P13797 630 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 SYT1P21579 422 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 KLRC2P26717 231 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 GRM5P41594 1212 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 RAD51AP2Q09MP3 1159 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 RTP2Q5QGT7 225 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 CES5AQ6NT32 575 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 LILRA6Q6PI73 481 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 TMC5Q6UXY8 1006 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 CMASQ8NFW8 434 aaPredicted RBP19.15■□□□□ 0.66
SMG6-214ENST00000573827 INTS4Q96HW7 963 aaKnown RBP19.15■□□□□ 0.66
SMG6-214ENST00000573827 MRPL4Q9BYD3 311 aaKnown RBP19.15■□□□□ 0.66
SMG6-214ENST00000573827 KMT5AQ9NQR1 393 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 KCND2Q9NZV8 630 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 RBM19Q9Y4C8 960 aaKnown RBP19.15■□□□□ 0.66
SMG6-214ENST00000573827 VWA8A3KMH1 1905 aa19.15■□□□□ 0.66
SMG6-214ENST00000573827 C2orf16Q68DN1 1984 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 C2CD4DB7Z1M9 353 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 NR1I2O75469 434 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 BMP15O95972 392 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 C1RP00736 705 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 THP07101 528 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 MTHFRP42898 656 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 ZXDAP98168 799 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 USP41Q3LFD5 358 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 HFE2Q6ZVN8 426 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 RHOBTB2Q9BYZ6 727 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 SFXN1Q9H9B4 322 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 FNIP2Q9P278 1114 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 SSX2IPQ9Y2D8 614 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 CLIC4Q9Y696 253 aa19.14■□□□□ 0.65
SMG6-214ENST00000573827 VPS37CA5D8V6 355 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 TMEM189-UBE2V1I3L0A0 370 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 ADH1AP07327 375 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 LONP1P36776 959 aaKnown RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 ZNF131P52739 623 aa19.13■□□□□ 0.65
SMG6-214ENST00000573827 CACNB1Q02641 598 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 SOX4Q06945 474 aaPredicted RBP19.13■□□□□ 0.65
SMG6-214ENST00000573827 TMEM132AQ24JP5 1023 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms