RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 PTGESO14684 152 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 EDN1P05305 212 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 GBP2P32456 591 aaPredicted RBP24.34■■□□□ 1.49
SNF8-216ENST00000573795 FAM187BQ17R55 369 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 RTP2Q5QGT7 225 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 GLYCTKQ8IVS8 523 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 SIX5Q8N196 739 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 PLEKHA4Q9H4M7 779 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 PDZD7Q9H5P4 517 aa24.34■■□□□ 1.49
SNF8-216ENST00000573795 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.34■■□□□ 1.49
SNF8-216ENST00000573795 PRR23AA6NEV1 266 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 MCM7P33993 719 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 HSP90AA2PQ14568 343 aaPredicted RBP24.33■■□□□ 1.49
SNF8-216ENST00000573795 NAB2Q15742 525 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 ELMSAN1Q6PJG2 1045 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 PRSS55Q6UWB4 352 aaPredicted RBP24.33■■□□□ 1.49
SNF8-216ENST00000573795 MCPH1Q8NEM0 835 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 STAMQ92783 540 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 POLR3CQ9BUI4 534 aaPredicted RBP24.33■■□□□ 1.49
SNF8-216ENST00000573795 ZDHHC7Q9NXF8 308 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 USP20Q9Y2K6 914 aa24.33■■□□□ 1.49
SNF8-216ENST00000573795 FAM186AA6NE01 2351 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 SPTBN4Q9H254 2564 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 KRBA1A5PL33 1030 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 ATP2B1P20020 1258 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 NEK4P51957 841 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 GUCY1B3Q02153 619 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 TUSC3Q13454 348 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 TRIM29Q14134 588 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 CCDC105Q8IYK2 499 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 HASPINQ8TF76 798 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 PRKD2Q9BZL6 878 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 CCDC113Q9H0I3 377 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 FBXL21Q9UKT6 434 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 WDR87Q6ZQQ6 2873 aa24.32■■□□□ 1.48
SNF8-216ENST00000573795 PTPRZ1P23471 2315 aaPredicted RBP24.32■■□□□ 1.48
SNF8-216ENST00000573795 CASTOR2A6NHX0 329 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 TADA2AO75478 443 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 KIF4AO95239 1232 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 CFHP08603 1231 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 FRMD5Q7Z6J6 570 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 ZBTB8OSQ8IWT0 167 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 SLC44A3Q8N4M1 653 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 SNTG2Q9NY99 539 aa24.31■■□□□ 1.48
SNF8-216ENST00000573795 SF3B1O75533 1304 aaKnown RBP eCLIP24.31■■□□□ 1.48
SNF8-216ENST00000573795 RECQL4O94761 1208 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 EEF1DP3Q658K8 133 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 NACC1Q96RE7 527 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 CLSTN3Q9BQT9 956 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 WNT16Q9UBV4 365 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 FBXW11Q9UKB1 542 aa24.3■■□□□ 1.48
SNF8-216ENST00000573795 TRIP11Q15643 1979 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 N4BP3O15049 544 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 ZMYND10O75800 440 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 CYP11B2P19099 503 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 RPA1P27694 616 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 CREMQ03060 361 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 PADI6Q6TGC4 694 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 GET4Q7L5D6 327 aaPredicted RBP24.29■■□□□ 1.48
SNF8-216ENST00000573795 LNX1Q8TBB1 728 aaPredicted RBP24.29■■□□□ 1.48
SNF8-216ENST00000573795 PIK3R5Q8WYR1 880 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 RTP3Q9BQQ7 232 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 C2orf40Q9H1Z8 148 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 PIDD1Q9HB75 910 aa24.29■■□□□ 1.48
SNF8-216ENST00000573795 ANHXE9PGG2 379 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 PRKCBP05771 671 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 OR52Z1P0C646 297 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 SRFP11831 508 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 LAMP2P13473 410 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 PRPF4BQ13523 1007 aaKnown RBP24.28■■□□□ 1.48
SNF8-216ENST00000573795 ECM1Q16610 540 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 NOSTRINQ8IVI9 506 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 DTWD2Q8NBA8 298 aa24.28■■□□□ 1.48
SNF8-216ENST00000573795 GVINP1Q7Z2Y8 2422 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 MYH15Q9Y2K3 1946 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 DCHS1Q96JQ0 3298 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ACKR2O00590 384 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ADAM12O43184 909 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 SEC24BO95487 1268 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 IGFBP6P24592 240 aaPredicted RBP24.27■■□□□ 1.48
SNF8-216ENST00000573795 NAMPTP43490 491 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 HTR4Q13639 388 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ANGPT1Q15389 498 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ZNF174Q15697 407 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 MAPK6Q16659 721 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 FAM171A1Q5VUB5 890 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ST13P5Q8NFI4 369 aaPredicted RBP24.27■■□□□ 1.48
SNF8-216ENST00000573795 NXPE3Q969Y0 559 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 TTPALQ9BTX7 342 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 KIFC3Q9BVG8 833 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNF8-216ENST00000573795 CA14Q9ULX7 337 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 NOTCH4Q99466 2003 aa24.27■■□□□ 1.48
SNF8-216ENST00000573795 ARHGEF35A5YM69 484 aa24.26■■□□□ 1.47
SNF8-216ENST00000573795 THP07101 528 aa24.26■■□□□ 1.47
SNF8-216ENST00000573795 PSMD5Q16401 504 aa24.26■■□□□ 1.47
SNF8-216ENST00000573795 GPR152Q8TDT2 470 aa24.26■■□□□ 1.47
SNF8-216ENST00000573795 POLD4Q9HCU8 107 aa24.26■■□□□ 1.47
SNF8-216ENST00000573795 NTHL1P78549 312 aa24.25■■□□□ 1.47
SNF8-216ENST00000573795 ORC2Q13416 577 aaPredicted RBP24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms