RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 HOXA3O43365 443 aaPredicted RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 ITGA10O75578 1167 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 OSMP13725 252 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 CANXP27824 592 aaKnown RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 EVA1CP58658 441 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 PUM1Q14671 1186 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDC27-215ENST00000573550 SYDE2Q5VT97 1194 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 C1QL3Q5VWW1 255 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 DBX2Q6ZNG2 339 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 ELOA2Q8IYF1 753 aaPredicted RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 ANKRD35Q8N283 1001 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 MDGA1Q8NFP4 955 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 FATE1Q969F0 183 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 IL17RAQ96F46 866 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 ACE2Q9BYF1 805 aaPredicted RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 ZNF277Q9NRM2 450 aaPredicted RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 TRHDEQ9UKU6 1024 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 GIT1Q9Y2X7 761 aa6.28□□□□□ -1.4
CDC27-215ENST00000573550 EIF2AK4Q9P2K8 1649 aaKnown RBP6.28□□□□□ -1.4
CDC27-215ENST00000573550 ZBED9Q6R2W3 1325 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 C9orf84Q5VXU9 1444 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 ANKRD50Q9ULJ7 1429 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 CYP27B1O15528 508 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 KATNA1O75449 491 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 HSPA5P11021 654 aaKnown RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 AGXTP21549 392 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 GZMKP49863 264 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 RABGGTBP53611 331 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 SLC5A3P53794 718 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 PPP3CAQ08209 521 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 MRPL49Q13405 166 aaKnown RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 USP39Q53GS9 565 aaKnown RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 MBNL2Q5VZF2 373 aaKnown RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 RNF207Q6ZRF8 634 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 Q6ZRM9 215 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 APBB1IPQ7Z5R6 666 aaPredicted RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 ZNF480Q8WV37 535 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 RIN2Q8WYP3 895 aaPredicted RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 HOXB13Q92826 284 aaPredicted RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 EXTL1Q92935 676 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 BRINP2Q9C0B6 783 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 CCDC8Q9H0W5 538 aaPredicted RBP6.27□□□□□ -1.41
CDC27-215ENST00000573550 GREM2Q9H772 168 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 DMRT3Q9NQL9 472 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 GPRC5DQ9NZD1 345 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 TRPS1Q9UHF7 1281 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 GPR45Q9Y5Y3 372 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 PLB1Q6P1J6 1458 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 MAGI2Q86UL8 1455 aa6.27□□□□□ -1.41
CDC27-215ENST00000573550 IQGAP3Q86VI3 1631 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 ANKRD62A6NC57 917 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 ALG1L2C9J202 215 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 FZD9O00144 591 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 GABRDO14764 452 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 GASTP01350 101 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 SCNN1GP51170 649 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 MALLQ13021 153 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 RRP1BQ14684 758 aaKnown RBP6.26□□□□□ -1.41
CDC27-215ENST00000573550 PTPROQ16827 1216 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 HTR3DQ70Z44 454 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 THEMISQ8N1K5 641 aaPredicted RBP6.26□□□□□ -1.41
CDC27-215ENST00000573550 C1orf162Q8NEQ5 155 aaPredicted RBP6.26□□□□□ -1.41
CDC27-215ENST00000573550 GPR156Q8NFN8 814 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 ZCRB1Q8TBF4 217 aaKnown RBP6.26□□□□□ -1.41
CDC27-215ENST00000573550 ST8SIA2Q92186 375 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 RRP7BPQ9NSQ0 103 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 CCDC141Q6ZP82 1450 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 PLEKHH2Q8IVE3 1493 aa6.26□□□□□ -1.41
CDC27-215ENST00000573550 PRG4Q92954 1404 aaPredicted RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 TRPM1Q7Z4N2 1603 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 BCORL1Q5H9F3 1711 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 KLRG2A4D1S0 409 aaPredicted RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 ADCY6O43306 1168 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 PHF2O75151 1096 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 IPO13O94829 963 aaKnown RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 MT-CO1P00395 513 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 GNAT2P19087 354 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 CRHR1P34998 444 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 MCAMP43121 646 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 ITKQ08881 620 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 ABCB5Q2M3G0 1257 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 MUM1L1Q5H9M0 696 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 Q6ZVL8 140 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 AMOTL1Q8IY63 956 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 MB21D1Q8N884 522 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 MTMR8Q96EF0 704 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 PDCD2LQ9BRP1 358 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 LSM14BQ9BX40 385 aaKnown RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 CPEB1Q9BZB8 566 aaKnown RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 RBM12Q9NTZ6 932 aaKnown RBP6.25□□□□□ -1.41
CDC27-215ENST00000573550 INSRP06213 1382 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 ZMYM3Q14202 1370 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 ATP10AO60312 1499 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 ERCC6Q03468 1493 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 SAMD9LQ8IVG5 1584 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 MYO5CQ9NQX4 1742 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 CDC42BPBQ9Y5S2 1711 aa6.25□□□□□ -1.41
CDC27-215ENST00000573550 RNF17Q9BXT8 1623 aaKnown RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms