RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 BMP15O95972 392 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 THP07101 528 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 PLA2G4BP0C869 781 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 MYBP10242 640 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 CLCN4P51793 760 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 OSTNP61366 133 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 CACNB1Q02641 598 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 MAPK7Q13164 816 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 TUSC3Q13454 348 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 DHX8Q14562 1220 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 HSP90AA2PQ14568 343 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 ZNF568Q3ZCX4 644 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 TMC5Q6UXY8 1006 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 SYT2Q8N9I0 419 aaPredicted RBP13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 AK8Q96MA6 479 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 FBXL18Q96ME1 805 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 RIPOR3Q96MK2 946 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 PAAF1Q9BRP4 392 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 TIPINQ9BVW5 301 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 MRPL4Q9BYD3 311 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 GPR62Q9BZJ7 368 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 CXCL16Q9H2A7 254 aa13.96□□□□□ -0.17
NPLOC4-213ENST00000573519 NPHP3-ACAD11A0A0J9YXS1 232 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TEX28O15482 410 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 LILRB3O75022 631 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 ADH1AP07327 375 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 HARSP12081 509 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SYT1P21579 422 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 GUCY2CP25092 1073 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 MTHFRP42898 656 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SMTNP53814 917 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 YARSP54577 528 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 STRN3Q13033 797 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 USP41Q3LFD5 358 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TMEM119Q4V9L6 283 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 HERC4Q5GLZ8 1057 aaPredicted RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 ATAT1Q5SQI0 421 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 GLYCTKQ8IVS8 523 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 KCTD17Q8N5Z5 321 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SNX21Q969T3 373 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 INTS4Q96HW7 963 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 ACO2Q99798 780 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TCHPQ9BT92 498 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 POMKQ9H5K3 350 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TMEM134Q9H6X4 195 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SFXN1Q9H9B4 322 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 C17orf75Q9HAS0 396 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TNFSF13BQ9Y275 285 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 HCN4Q9Y3Q4 1203 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 NR2E1Q9Y466 385 aa13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 TDRD15B5MCY1 1934 aaKnown RBP13.95□□□□□ -0.18
NPLOC4-213ENST00000573519 SF3B1O75533 1304 aaKnown RBP eCLIP13.94□□□□□ -0.182e-7■■■■□ 26.7
NPLOC4-213ENST00000573519 C5orf42Q9H799 3197 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 PRR33A8MZF0 331 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 KIF4AO95239 1232 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 PLS3P13797 630 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 LONP1P36776 959 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 DSG1Q02413 1049 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 GRIN1Q05586 938 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 KIAA0319Q5VV43 1072 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 FAM173BQ6P4H8 233 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 TAS1R3Q7RTX0 852 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 GPBP1Q86WP2 473 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 CEP57Q86XR8 500 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 PALB2Q86YC2 1186 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 HSCBQ8IWL3 235 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 RNF168Q8IYW5 571 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 CEP120Q8N960 986 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 RIN2Q8WYP3 895 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 CCDC94Q9BW85 323 aaPredicted RBP13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 TARS2Q9BW92 718 aaKnown RBP13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 CDT1Q9H211 546 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 MAN1C1Q9NR34 630 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 KCND2Q9NZV8 630 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 ARHGAP28Q9P2N2 729 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 ANKFY1Q9P2R3 1169 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 KCNG1Q9UIX4 513 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 CLIC4Q9Y696 253 aa13.94□□□□□ -0.18
NPLOC4-213ENST00000573519 EFEMP2O95967 443 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 GLUD1P00367 558 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 KRT18P05783 430 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 SPATA31D3P0C874 917 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 RPL17P18621 184 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 GRM5P41594 1212 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 MATR3P43243 847 aaKnown RBP eCLIP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 CEBPZQ03701 1054 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 RESTQ13127 1097 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 KARSQ15046 597 aaKnown RBP13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 FAM171A1Q5VUB5 890 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 ELMSAN1Q6PJG2 1045 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 SPATA31D4Q6ZUB0 917 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 SPRYD3Q8NCJ5 442 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 SPIRE2Q8WWL2 714 aa13.93□□□□□ -0.18
NPLOC4-213ENST00000573519 BICD1Q96G01 975 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms