RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 PLCD3Q8N3E9 789 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 KIAA0895Q8NCT3 520 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.85□□□□□ -0.67
SMG6-213ENST00000573166 LRRC45Q96CN5 670 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 MMP3P08254 477 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 VEGFBP49765 207 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 CST9Q5W186 159 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 ENOSF1Q7L5Y1 443 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 TTC39CQ8N584 583 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 MYH1P12882 1939 aa10.85□□□□□ -0.67
SMG6-213ENST00000573166 A0A1W2PQC6 194 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ACKR2O00590 384 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ASGR1P07306 291 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
SMG6-213ENST00000573166 ZNF410Q86VK4 478 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 CCDC170Q8IYT3 715 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 PANX2Q96RD6 677 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 SEMA6BQ9H3T3 888 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 SBF2Q86WG5 1849 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 DDX60Q8IY21 1712 aaKnown RBP10.84□□□□□ -0.67
SMG6-213ENST00000573166 B3GAT3O94766 335 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 PPP1R7Q15435 360 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 TTI2Q6NXR4 508 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 PPP1R2P3Q6NXS1 205 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ACRBPQ8NEB7 543 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 NPLOC4Q8TAT6 608 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 TMEM8AQ9HCN3 771 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 TRPV2Q9Y5S1 764 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 MAFO75444 373 aaPredicted RBP10.84□□□□□ -0.67
SMG6-213ENST00000573166 NDUFA10O95299 355 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 SLC9A1P19634 815 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 GNA15P30679 374 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 GJA5P36382 358 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ITGA7Q13683 1181 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 SEPT7Q16181 437 aaKnown RBP10.84□□□□□ -0.67
SMG6-213ENST00000573166 TMCO3Q6UWJ1 677 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ASAP3Q8TDY4 903 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 SLITRK6Q9H5Y7 841 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
SMG6-213ENST00000573166 UBQLN1Q9UMX0 589 aaKnown RBP10.84□□□□□ -0.67
SMG6-213ENST00000573166 MAPTP10636 758 aaKnown RBP10.83□□□□□ -0.68
SMG6-213ENST00000573166 KRT81Q14533 505 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 KCNA10Q16322 511 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 APPL2Q8NEU8 664 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 TNIP3Q96KP6 325 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 PI4K2AQ9BTU6 479 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 MRPL47Q9HD33 250 aaKnown RBP10.83□□□□□ -0.68
SMG6-213ENST00000573166 RNF186Q9NXI6 227 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 USP27XA6NNY8 438 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ITGB3P05106 788 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 RFX1P22670 979 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 GLRA2P23416 452 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 NOP14P78316 857 aaKnown RBP10.83□□□□□ -0.68
SMG6-213ENST00000573166 IFFO1Q0D2I5 559 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 PAN2Q504Q3 1202 aaKnown RBP10.83□□□□□ -0.68
SMG6-213ENST00000573166 GPAT2Q6NUI2 795 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ELMSAN1Q6PJG2 1045 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 RNF139Q8WU17 664 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ABHD10Q9NUJ1 306 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 APEX2Q9UBZ4 518 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 CASZ1Q86V15 1759 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 A0A1B0GTH6 734 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 AKAP3O75969 853 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 GNRH1P01148 92 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 GJB1P08034 283 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 PDGFRBP09619 1106 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ADORA2BP29275 332 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 NOVP48745 357 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 GRB14Q14449 540 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ECM1Q16610 540 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 ZNF507Q8TCN5 953 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 DDX20Q9UHI6 824 aaKnown RBP10.83□□□□□ -0.68
SMG6-213ENST00000573166 CDY2AQ9Y6F7 541 aa10.83□□□□□ -0.68
SMG6-213ENST00000573166 KCNK3O14649 394 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 LYPLA2O95372 231 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SLU7O95391 586 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 ALDH7A1P49419 539 aaKnown RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 CACNA1SQ13698 1873 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SLC27A1Q6PCB7 646 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 MTHFD1LQ6UB35 978 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 HPDLQ96IR7 371 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 ZBTB45Q96K62 511 aaPredicted RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 MTMR12Q9C0I1 747 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 BCORQ6W2J9 1755 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 H0YHG0 523 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 M0QYV0 167 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 CYP26A1O43174 497 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 CXCL8P10145 99 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 UCHL3P15374 230 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 CCL23P55773 120 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 KCNA1Q09470 495 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 ZPBP2Q6X784 338 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 SH3RF1Q7Z6J0 888 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 ZNF467Q7Z7K2 595 aaPredicted RBP10.82□□□□□ -0.68
SMG6-213ENST00000573166 PGAP2Q9UHJ9 254 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
SMG6-213ENST00000573166 FAM237AA0A1B0GTK4 181 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms