RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 DHX8Q14562 1220 aaKnown RBP17.73■□□□□ 0.43
NDE1-205ENST00000572756 NAB2Q15742 525 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 CLUL1Q15846 466 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 FAM178BQ8IXR5 827 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 SMRP1Q8NCR6 262 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 AUTS2Q8WXX7 1259 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 RPS6KC1Q96S38 1066 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 STK17AQ9UEE5 414 aa17.73■□□□□ 0.43
NDE1-205ENST00000572756 PDCD11Q14690 1871 aaKnown RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 F8W810 466 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 LILRB3O75022 631 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 BRD1O95696 1058 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 F13A1P00488 732 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 PKP1Q13835 747 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 BMS1Q14692 1282 aaKnown RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 PTPN14Q15678 1187 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 SMAD2Q15796 467 aaKnown RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 ZNF568Q3ZCX4 644 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 APBB1IPQ7Z5R6 666 aaPredicted RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 CEP120Q8N960 986 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 ZNF396Q96N95 335 aaPredicted RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 FIZ1Q96SL8 496 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 TFIP11Q9UBB9 837 aaKnown RBP17.72■□□□□ 0.43
NDE1-205ENST00000572756 CCDC39Q9UFE4 941 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 GDAQ9Y2T3 454 aa17.72■□□□□ 0.43
NDE1-205ENST00000572756 A0A087X0B3 334 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.71■□□□□ 0.43
NDE1-205ENST00000572756 H0YCG3 227 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 CLASP2O75122 1294 aaKnown RBP17.71■□□□□ 0.43
NDE1-205ENST00000572756 PPP6R2O75170 966 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 YEATS4O95619 227 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 SOD2P04179 222 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 MCF2P10911 925 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 GRM5P41594 1212 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 TUSC3Q13454 348 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 STK38Q15208 465 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 FOXD4L5Q5VV16 416 aaPredicted RBP17.71■□□□□ 0.43
NDE1-205ENST00000572756 MPZL3Q6UWV2 235 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 FOXD4L4Q8WXT5 416 aaPredicted RBP17.71■□□□□ 0.43
NDE1-205ENST00000572756 HERC2P3Q9BVR0 1158 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 PARVGQ9HBI0 331 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 CD320Q9NPF0 282 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 CACNG4Q9UBN1 327 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 FAM50BQ9Y247 325 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 HCFC2Q9Y5Z7 792 aa17.71■□□□□ 0.43
NDE1-205ENST00000572756 SPTLC2O15270 562 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 NR1I2O75469 434 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 TOM1L1O75674 476 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 FAM13AO94988 1023 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 THP07101 528 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 TXLNAP40222 546 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 STRN3Q13033 797 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 XKR4Q5GH76 650 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 RRAGBQ5VZM2 374 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 ALKAL1Q6UXT8 129 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 TAS1R1Q7RTX1 841 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 HAUS6Q7Z4H7 955 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 SPRYD3Q8NCJ5 442 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 ZBTB45Q96K62 511 aaPredicted RBP17.7■□□□□ 0.42
NDE1-205ENST00000572756 PPP1R10Q96QC0 940 aaKnown RBP17.7■□□□□ 0.42
NDE1-205ENST00000572756 PAAF1Q9BRP4 392 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 COLEC11Q9BWP8 271 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 PRKAG3Q9UGI9 489 aa17.7■□□□□ 0.42
NDE1-205ENST00000572756 SCP2P22307 547 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 ANKRD54Q6NXT1 300 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 LLGL2Q6P1M3 1020 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 SYCE2Q6PIF2 218 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 CCDC73Q6ZRK6 1079 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 ZBTB33Q86T24 672 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 MYCT1Q8N699 235 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 SLC22A17Q8WUG5 538 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 RABGGTAQ92696 567 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 CCDC94Q9BW85 323 aaPredicted RBP17.69■□□□□ 0.42
NDE1-205ENST00000572756 GPR62Q9BZJ7 368 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 S1PR5Q9H228 398 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 CHST7Q9NS84 486 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 ADAM28Q9UKQ2 775 aa17.69■□□□□ 0.42
NDE1-205ENST00000572756 VWA8A3KMH1 1905 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 MYMKA6NI61 221 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 C19orf67A6NJJ6 358 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 MEFVO15553 781 aaPredicted RBP17.68■□□□□ 0.42
NDE1-205ENST00000572756 TRAK2O60296 914 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 TBCAO75347 108 aaKnown RBP17.68■□□□□ 0.42
NDE1-205ENST00000572756 PIGRP01833 764 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 KRT18P05783 430 aaKnown RBP17.68■□□□□ 0.42
NDE1-205ENST00000572756 SRGAP2BP0DMP2 458 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 CA8P35219 290 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 PLXNA3P51805 1871 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 ZP2Q05996 745 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 MCL1Q07820 350 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 HSP90AA2PQ14568 343 aaPredicted RBP17.68■□□□□ 0.42
NDE1-205ENST00000572756 NOLC1Q14978 699 aaKnown RBP eCLIP17.68■□□□□ 0.42
NDE1-205ENST00000572756 KIAA0319Q5VV43 1072 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 FUT10Q6P4F1 479 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 ADHFE1Q8IWW8 467 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 SUSD6Q92537 303 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 DDX12PQ92771 950 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 CASP10Q92851 521 aa17.68■□□□□ 0.42
NDE1-205ENST00000572756 DNAJC19Q96DA6 116 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms