RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 KIAA0895Q8NCT3 520 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 FBXO22Q8NEZ5 403 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 RABGGTAQ92696 567 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 FAM84AQ96KN4 292 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 ZMAT2Q96NC0 199 aaKnown RBP7.66□□□□□ -1.18
SMG6-209ENST00000571442 PAAF1Q9BRP4 392 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 VN1R3Q9BXE9 311 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 GBP3Q9H0R5 595 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 MRPL44Q9H9J2 332 aaKnown RBP7.66□□□□□ -1.18
SMG6-209ENST00000571442 ALG13Q9NP73 1137 aaKnown RBP7.66□□□□□ -1.18
SMG6-209ENST00000571442 OLFML3Q9NRN5 406 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 MARCH5Q9NX47 278 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 ANKFY1Q9P2R3 1169 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 PARP2Q9UGN5 583 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 MTCH2Q9Y6C9 303 aa7.66□□□□□ -1.18
SMG6-209ENST00000571442 VWA8A3KMH1 1905 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 TGFB1I1O43294 461 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 HOXA2O43364 376 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GTPBP6O43824 516 aaPredicted RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 ZC3H11AO75152 810 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMG6-209ENST00000571442 TOM1L1O75674 476 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GALTP07902 379 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SKIP12755 728 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GAP43P17677 238 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 IGFBP4P22692 258 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GRM5P41594 1212 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 BCAR1P56945 870 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SOX4Q06945 474 aaPredicted RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 SPAG1Q07617 926 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 MCL1Q07820 350 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 DSC1Q08554 894 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 STRN3Q13033 797 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 STK4Q13043 487 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GPM6BQ13491 265 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 PNOCQ13519 176 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 NOLC1Q14978 699 aaKnown RBP eCLIP7.65□□□□□ -1.18
SMG6-209ENST00000571442 SLC10A6Q3KNW5 377 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 DCAF4L1Q3SXM0 396 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 FAM26FQ5R3K3 315 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 L1TD1Q5T7N2 865 aaKnown RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 KCNT2Q6UVM3 1135 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GLB1LQ6UWU2 654 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 CD300LGQ6UXG3 332 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 CRELD2Q6UXH1 353 aaPredicted RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 ALKAL1Q6UXT8 129 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 ZPBP2Q6X784 338 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 CCDC65Q8IXS2 484 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 COLGALT2Q8IYK4 626 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 CEP57L1Q8IYX8 460 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 ABI1Q8IZP0 508 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SLC39A11Q8N1S5 342 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 CNNM3Q8NE01 707 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SPPL3Q8TCT6 385 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SCFD1Q8WVM8 642 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 PGBD4Q96DM1 585 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GAS2L1Q99501 681 aaPredicted RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 TRIM6Q9C030 488 aaPredicted RBP7.65□□□□□ -1.18
SMG6-209ENST00000571442 MAGEF1Q9HAY2 307 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GOLGA2P5Q9HBQ8 144 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SLC39A2Q9NP94 309 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 SEL1LQ9UBV2 794 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 GIT1Q9Y2X7 761 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 STYXL1Q9Y6J8 313 aa7.65□□□□□ -1.18
SMG6-209ENST00000571442 TRANK1O15050 2925 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 A0A0B4J269 797 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 PVALEFA0A1B0GWK0 134 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 CASTOR2A6NHX0 329 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 NRP1O14786 923 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 HNRNPDLO14979 420 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 PRPF40AO75400 957 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 FGF18O76093 207 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 RPN1P04843 607 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 CXCL8P10145 99 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 MCF2P10911 925 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 LAG3P18627 525 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 GTF2F1P35269 517 aaKnown RBP eCLIP7.64□□□□□ -1.19
SMG6-209ENST00000571442 LIG4P49917 911 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 GUCY2FP51841 1108 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 ERVFC1P60507 584 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 AMPD3Q01432 767 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 FAM160A1Q05DH4 1040 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 NCBP1Q09161 790 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 CCDC85BQ15834 202 aaPredicted RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 ENOX2Q16206 610 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 XKR4Q5GH76 650 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 SPOUT1Q5T280 376 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 TAS1R1Q7RTX1 841 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 ADGRD2Q7Z7M1 963 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 NELFCDQ8IXH7 590 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 MICALL1Q8N3F8 863 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 ZNF507Q8TCN5 953 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 POF1BQ8WVV4 589 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 BICD1Q96G01 975 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 SNX27Q96L92 541 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 SAMD11Q96NU1 681 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 PPP1R10Q96QC0 940 aaKnown RBP7.64□□□□□ -1.19
SMG6-209ENST00000571442 ADPGKQ9BRR6 497 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 CBWD1Q9BRT8 395 aa7.64□□□□□ -1.19
SMG6-209ENST00000571442 TCHPQ9BT92 498 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms