RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 CCDC113Q9H0I3 377 aa19.42■□□□□ 0.7
CIITA-206ENST00000571190 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.42■□□□□ 0.7
CIITA-206ENST00000571190 SNTG2Q9NY99 539 aa19.42■□□□□ 0.7
CIITA-206ENST00000571190 EPS15L1Q9UBC2 864 aa19.42■□□□□ 0.7
CIITA-206ENST00000571190 TADA2AO75478 443 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 CYP11B2P19099 503 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 AOC1P19801 751 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 IGFBP6P24592 240 aaPredicted RBP19.41■□□□□ 0.7
CIITA-206ENST00000571190 GBP2P32456 591 aaPredicted RBP19.41■□□□□ 0.7
CIITA-206ENST00000571190 NBL1P41271 181 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 TUSC3Q13454 348 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 ECM1Q16610 540 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 EEF1DP3Q658K8 133 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 PADI6Q6TGC4 694 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 ASCL5Q7RTU5 278 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 SLC44A3Q8N4M1 653 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 PRKD2Q9BZL6 878 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 POLD4Q9HCU8 107 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 ZDHHC7Q9NXF8 308 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 PPP4R2Q9NY27 417 aa19.41■□□□□ 0.7
CIITA-206ENST00000571190 KRBA1A5PL33 1030 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 CASTOR2A6NHX0 329 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 KIF4AO95239 1232 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 OR52Z1P0C646 297 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 ELMSAN1Q6PJG2 1045 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 NOSTRINQ8IVI9 506 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 ZBTB8OSQ8IWT0 167 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 SIX5Q8N196 739 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 C4orf32Q8N8J7 132 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 HASPINQ8TF76 798 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 STAMQ92783 540 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 CLSTN3Q9BQT9 956 aa19.4■□□□□ 0.7
CIITA-206ENST00000571190 CACNA1HO95180 2353 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 ACKR2O00590 384 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 N4BP3O15049 544 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 ZMYND10O75800 440 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 RECQL4O94761 1208 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 PRKCBP05771 671 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 NEFLP07196 543 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 PRPF4BQ13523 1007 aaKnown RBP19.39■□□□□ 0.69
CIITA-206ENST00000571190 MAPK6Q16659 721 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 CCDC83Q8IWF9 413 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 LNX1Q8TBB1 728 aaPredicted RBP19.39■□□□□ 0.69
CIITA-206ENST00000571190 PIK3R5Q8WYR1 880 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 KIFC3Q9BVG8 833 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 C2orf40Q9H1Z8 148 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 FOXP1Q9H334 677 aaPredicted RBP19.39■□□□□ 0.69
CIITA-206ENST00000571190 WNT16Q9UBV4 365 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 FBXL21Q9UKT6 434 aa19.39■□□□□ 0.69
CIITA-206ENST00000571190 SF3B1O75533 1304 aaKnown RBP eCLIP19.39■□□□□ 0.69
CIITA-206ENST00000571190 ARHGEF35A5YM69 484 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 ADAM12O43184 909 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 THP07101 528 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 CFHP08603 1231 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 LAMP2P13473 410 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 NAMPTP43490 491 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 ORC2Q13416 577 aaPredicted RBP19.38■□□□□ 0.69
CIITA-206ENST00000571190 SAFBQ15424 915 aaKnown RBP eCLIP19.38■□□□□ 0.69
CIITA-206ENST00000571190 NT5DC1Q5TFE4 455 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 FAM171A1Q5VUB5 890 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 DENND4AQ7Z401 1863 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 CCDC105Q8IYK2 499 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 C8orf76Q96K31 380 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 TTPALQ9BTX7 342 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 PIDD1Q9HB75 910 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 FBXW11Q9UKB1 542 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 LIMCH1Q9UPQ0 1083 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 USP34Q70CQ2 3546 aa19.38■□□□□ 0.69
CIITA-206ENST00000571190 PRR23AA6NEV1 266 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 ANHXE9PGG2 379 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 LIG1P18858 919 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 CREMQ03060 361 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 TTC38Q5R3I4 469 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 CD300LGQ6UXG3 332 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 ST13P5Q8NFI4 369 aaPredicted RBP19.37■□□□□ 0.69
CIITA-206ENST00000571190 FBXO18Q8NFZ0 1043 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 ERMNQ8TAM6 284 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.37■□□□□ 0.69
CIITA-206ENST00000571190 ARID2Q68CP9 1835 aa19.37■□□□□ 0.69
CIITA-206ENST00000571190 MUTP22033 750 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 HTR4Q13639 388 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 NBR1Q14596 966 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 GET4Q7L5D6 327 aaPredicted RBP19.36■□□□□ 0.69
CIITA-206ENST00000571190 FRMD5Q7Z6J6 570 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 CEP57Q86XR8 500 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 DTWD2Q8NBA8 298 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 DEPTORQ8TB45 409 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 NXPE3Q969Y0 559 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 RTP3Q9BQQ7 232 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 LLPHQ9BRT6 129 aaKnown RBP19.36■□□□□ 0.69
CIITA-206ENST00000571190 GDAQ9Y2T3 454 aa19.36■□□□□ 0.69
CIITA-206ENST00000571190 SRFP11831 508 aa19.35■□□□□ 0.69
CIITA-206ENST00000571190 FXR2P51116 673 aaKnown RBP eCLIP19.35■□□□□ 0.69
CIITA-206ENST00000571190 NTHL1P78549 312 aa19.35■□□□□ 0.69
CIITA-206ENST00000571190 PSMD5Q16401 504 aa19.35■□□□□ 0.69
CIITA-206ENST00000571190 TMEM132AQ24JP5 1023 aa19.35■□□□□ 0.69
CIITA-206ENST00000571190 GRASPQ7Z6J2 395 aaPredicted RBP19.35■□□□□ 0.69
CIITA-206ENST00000571190 PPP1R10Q96QC0 940 aaKnown RBP19.35■□□□□ 0.69
CIITA-206ENST00000571190 RPP25Q9BUL9 199 aaKnown RBP19.35■□□□□ 0.69
CIITA-206ENST00000571190 BHMT2Q9H2M3 363 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms