RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 TSPAN1O60635 241 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 MAFO75444 373 aaPredicted RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 CAPNS1P04632 268 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 EDN1P05305 212 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 CALM1P0DP23 149 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 CALM2P0DP24 149 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 CALM3P0DP25 149 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 CHMLP26374 656 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 VIPR2P41587 438 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 NUCB1Q02818 461 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 FOXC1Q12948 553 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 BMS1Q14692 1282 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 NAB2Q15742 525 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 AMHR2Q16671 573 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 VITQ6UXI7 678 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 HS6ST3Q8IZP7 471 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 CELF5Q8N6W0 485 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 EXOC6Q8TAG9 804 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 TTC8Q8TAM2 541 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 URGCPQ8TCY9 931 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 HDAC7Q8WUI4 952 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 SLC5A5Q92911 643 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 TNPO1Q92973 898 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 CHFRQ96EP1 664 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 LZTS2Q9BRK4 669 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 LSM14BQ9BX40 385 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 FNIP2Q9P278 1114 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 LHX6Q9UPM6 363 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
SMG6-205ENST00000570659 RBM8AQ9Y5S9 174 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 HELZ2Q9BYK8 2649 aaKnown RBP8.09□□□□□ -1.11
SMG6-205ENST00000570659 CACNA1EQ15878 2313 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 CASTOR2A6NHX0 329 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 I3L4J1 428 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 PTGESO14684 152 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 EXTL3O43909 919 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 DTNBO60941 627 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 PSMD10O75832 226 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 TDP2O95551 362 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 SRGAP2CP0DJJ0 459 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 SFPQP23246 707 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG6-205ENST00000570659 CCNE1P24864 410 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 TMOD1P28289 359 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 RAB27AP51159 221 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 LIMK1P53667 647 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 TRDNQ13061 729 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 PLA2G2CQ5R387 149 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 NAIF1Q69YI7 327 aaPredicted RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 KIAA1211LQ6NV74 962 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 ZNF852Q6ZMS4 543 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 NFXL1Q6ZNB6 911 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 FAM43BQ6ZT52 329 aaPredicted RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 SMAP1Q8IYB5 467 aaPredicted RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 PRPF31Q8WWY3 499 aaKnown RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 SECISBP2LQ93073 1101 aaKnown RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 XPNPEP1Q9NQW7 623 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 BARHL2Q9NY43 387 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 SNTG2Q9NY99 539 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 ADAM28Q9UKQ2 775 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 CEP131Q9UPN4 1083 aa8.08□□□□□ -1.12
SMG6-205ENST00000570659 U3KPZ7 1027 aaPredicted RBP8.08□□□□□ -1.12
SMG6-205ENST00000570659 A0A087WWV3 80 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 SOBPA7XYQ1 873 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 WDR64B1ANS9 1081 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 SLC27A2O14975 620 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 DCLK1O15075 740 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 SGSM2O43147 1006 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 LRP3O75074 770 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 ECI2O75521 394 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 SEC24AO95486 1093 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 RHOP08100 348 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 ITGA4P13612 1032 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 CIITAP33076 1130 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 RAP1GAPP47736 663 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 AP3B2Q13367 1082 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 PSMD5Q16401 504 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 AASDHQ4L235 1098 aaPredicted RBP8.07□□□□□ -1.12
SMG6-205ENST00000570659 PABPC1LQ4VXU2 614 aaKnown RBP8.07□□□□□ -1.12
SMG6-205ENST00000570659 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 AXDND1Q5T1B0 1012 aaPredicted RBP8.07□□□□□ -1.12
SMG6-205ENST00000570659 APOA5Q6Q788 366 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 C19orf48Q6RUI8 117 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 MAMSTRQ6ZN01 415 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 MTSS1LQ765P7 747 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 ZNF410Q86VK4 478 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 C3orf58Q8NDZ4 430 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 ASAP3Q8TDY4 903 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 FAM3CQ92520 227 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 FAM167AQ96KS9 214 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 FAM193BQ96PV7 902 aaPredicted RBP8.07□□□□□ -1.12
SMG6-205ENST00000570659 SCNM1Q9BWG6 230 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 ZNF334Q9HCZ1 680 aaPredicted RBP8.07□□□□□ -1.12
SMG6-205ENST00000570659 NRBP2Q9NSY0 501 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 TBC1D22BQ9NU19 505 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 KLK13Q9UKR3 277 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 COL4A3BPQ9Y5P4 624 aa8.07□□□□□ -1.12
SMG6-205ENST00000570659 PIAS3Q9Y6X2 628 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms