RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 RAB27AP51159 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 VCPP55072 806 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 WDR4P57081 412 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 PRR20EP86478 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PRR20CP86479 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PRR20DP86480 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PRR20BP86481 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 PRR20AP86496 221 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 CDC42EP1Q00587 391 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 ITIH3Q06033 890 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 STK3Q13188 491 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 MTMR3Q13615 1198 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 KCNC3Q14003 757 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 NONOQ15233 471 aaKnown RBP eCLIP7.27□□□□□ -1.25
SMG6-204ENST00000570606 TARBP2Q15633 366 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 Q4G0T1 1027 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 TBCELQ5QJ74 424 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 RARS2Q5T160 578 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 PLA2G4FQ68DD2 849 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 TMEM184AQ6ZMB5 413 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 BLIDQ8IZY5 108 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 CYP4X1Q8N118 509 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 VPS52Q8N1B4 723 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 FBXL16Q8N461 479 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 TDRD5Q8NAT2 981 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 KREMEN2Q8NCW0 462 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 URGCPQ8TCY9 931 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 RSPH1Q8WYR4 309 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 LPPQ93052 612 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 ASIC4Q96FT7 647 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 RIPOR3Q96MK2 946 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 JPH2Q9BR39 696 aaPredicted RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 C2orf49Q9BVC5 232 aaPredicted RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 INO80BQ9C086 356 aaPredicted RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 S1PR5Q9H228 398 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 POMKQ9H5K3 350 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 CHST12Q9NRB3 414 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 SUCLA2Q9P2R7 463 aaPredicted RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 DDX25Q9UHL0 483 aaKnown RBP7.27□□□□□ -1.25
SMG6-204ENST00000570606 CDH22Q9UJ99 828 aa7.27□□□□□ -1.25
SMG6-204ENST00000570606 DMDP11532 3685 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 MYO15AQ9UKN7 3530 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 PLXNA3P51805 1871 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 CCDC194A0A1B0GVG4 234 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 C2CD4DB7Z1M9 353 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 CDK2AP1O14519 115 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 SLC37A4O43826 429 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 MARCH6O60337 910 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 DKC1O60832 514 aaKnown RBP eCLIP7.26□□□□□ -1.25
SMG6-204ENST00000570606 CXCL14O95715 111 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 WEE2P0C1S8 567 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 POLGP54098 1239 aaPredicted RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 PSMC5P62195 406 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 TCF15Q12870 199 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 TOB2Q14106 344 aaPredicted RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 NAA30Q147X3 362 aaPredicted RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 TLR1Q15399 786 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 INF2Q27J81 1249 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 LETM2Q2VYF4 491 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 NOMO2Q5JPE7 1267 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 KIAA1841Q6NSI8 718 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 MOXD1Q6UVY6 613 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 RUFY3Q7L099 469 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 KRT25Q7Z3Z0 450 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 CABP7Q86V35 215 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 ZNF295-AS1Q8N0V1 137 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 MRPL43Q8N983 215 aaKnown RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 DAGLBQ8NCG7 672 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 ETNPPLQ8TBG4 499 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 AUTS2Q8WXX7 1259 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 SLC7A3Q8WY07 619 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 PGBD4Q96DM1 585 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 NIFKQ9BYG3 293 aaKnown RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 ZBP1Q9H171 429 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 SLKQ9H2G2 1235 aaPredicted RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 ADAM7Q9H2U9 754 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 FAM105AQ9NUU6 356 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 TBC1D13Q9NVG8 400 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 FAM86C1Q9NVL1 165 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 DBR1Q9UK59 544 aaKnown RBP7.26□□□□□ -1.25
SMG6-204ENST00000570606 SORCS3Q9UPU3 1222 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 COL4A3BPQ9Y5P4 624 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 CYP46A1Q9Y6A2 500 aa7.26□□□□□ -1.25
SMG6-204ENST00000570606 CYP3A7-CYP3A51PA0A087WV96 503 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 IGKV6-21A0A0C4DH24 114 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 EDIL3O43854 480 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CDKL5O76039 1030 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 PDGFBP01127 241 aaPredicted RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 SSBP05455 408 aaKnown RBP eCLIP7.25□□□□□ -1.25
SMG6-204ENST00000570606 CTSAP10619 480 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 EPCAMP16422 314 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 XBP1P17861 261 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 CYP3A7P24462 503 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 QARSP47897 775 aaKnown RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 SLC11A1P49279 550 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 PSMA6P60900 246 aaKnown RBP7.25□□□□□ -1.25
SMG6-204ENST00000570606 GIT2Q14161 759 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 NCAPH2Q6IBW4 605 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 GALNT17Q6IS24 598 aa7.25□□□□□ -1.25
SMG6-204ENST00000570606 ANO5Q75V66 913 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms