RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 SYNE4Q8N205 404 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 ACRBPQ8NEB7 543 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 DIS3LQ8TF46 1054 aaKnown RBP8.24□□□□□ -1.09
CNOT1-222ENST00000570139 DLG3Q92796 817 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 RPGRQ92834 1020 aaKnown RBP8.24□□□□□ -1.09
CNOT1-222ENST00000570139 NEUROD6Q96NK8 337 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 MS4A5Q9H3V2 200 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 MSRAQ9UJ68 235 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 DSEQ9UL01 958 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 ATP23Q9Y6H3 246 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 X6R8D5 127 aa8.24□□□□□ -1.09
CNOT1-222ENST00000570139 KLRG2A4D1S0 409 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 FAM227AF5H4B4 570 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 RBAK-RBAKDNI3L0D1 243 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 KCNK3O14649 394 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 TBX3O15119 743 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MAFKO60675 156 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 POU2F2P09086 479 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 COL6A2P12110 1019 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MCCP23508 829 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 PTX3P26022 381 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 SERPINB3P29508 390 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 HOXA10P31260 410 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 SLC5A3P53794 718 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 GRAPQ13588 217 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MBTPS1Q14703 1052 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 EPHA7Q15375 998 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 EZH2Q15910 746 aaKnown RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 TTC39AQ5SRH9 613 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MROH9Q5TGP6 573 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 ESRP1Q6NXG1 681 aaKnown RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 C1orf228Q6PIY5 440 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 SRLQ86TD4 932 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 COL23A1Q86Y22 540 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 GRAPLQ8TC17 118 aaPredicted RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 DPF3Q92784 378 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 GATA6Q92908 595 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 RBM17Q96I25 401 aaKnown RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 ACO2Q99798 780 aaKnown RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 DBNDD2Q9BQY9 259 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 SELENOOQ9BVL4 669 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 BRIP1Q9BX63 1249 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 PUS3Q9BZE2 481 aaKnown RBP8.23□□□□□ -1.09
CNOT1-222ENST00000570139 C22orf23Q9BZE7 217 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 SLC6A20Q9NP91 592 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 DIAPH3Q9NSV4 1193 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 ERVK13-1Q9NX77 482 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MARCH2Q9P0N8 246 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 DMTF1Q9Y222 760 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 ANKRD31Q8N7Z5 1873 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 MYH7P12883 1935 aa8.23□□□□□ -1.09
CNOT1-222ENST00000570139 DLEC1Q9Y238 1755 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 DOCK2Q92608 1830 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 TCRBV5S4A2TA0A5A2 114 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 TMEM82A0PJX8 343 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 C22orf46C9J442 243 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 NKRFO15226 690 aaKnown RBP eCLIP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ZFYP08048 801 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 FGFR2P21802 821 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 FPR2P25090 351 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 CHMLP26374 656 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 RPS8P62241 208 aaKnown RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 FAM193AP78312 1265 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 SRSF2Q01130 221 aaKnown RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 CHAF1AQ13111 956 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 STK3Q13188 491 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ADGRE1Q14246 886 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 TMEM132BQ14DG7 1078 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 CPZQ66K79 652 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ZSCAN25Q6NSZ9 544 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 RIOX2Q8IUF8 465 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 SMAP1Q8IYB5 467 aaPredicted RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 CAMKK1Q8N5S9 505 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 PAF1Q8N7H5 531 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ANKRD42Q8N9B4 389 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ZBTB34Q8NCN2 500 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 VPS37AQ8NEZ2 397 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 C1GALT1C1Q96EU7 318 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 RAX2Q96IS3 184 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 CRAMP1Q96RY5 1269 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 HERPUD2Q9BSE4 406 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 GTPBP4Q9BZE4 634 aaKnown RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 WNT8AQ9H1J5 351 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 ANAPC4Q9UJX5 808 aa8.22□□□□□ -1.09
CNOT1-222ENST00000570139 PDS5AQ29RF7 1337 aaKnown RBP8.22□□□□□ -1.09
CNOT1-222ENST00000570139 MYH13Q9UKX3 1938 aa8.21□□□□□ -1.09
CNOT1-222ENST00000570139 MAST2Q6P0Q8 1798 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 H3BS24 57 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 BBOX1O75936 387 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 SETSIPP0DME0 302 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 C5AR1P21730 350 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 RPL10P27635 214 aaKnown RBP8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TRAPPC10P48553 1259 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 SLC16A1P53985 500 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 TIMM10P62072 90 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 CHRNDQ07001 517 aa8.21□□□□□ -1.1
CNOT1-222ENST00000570139 DDR1Q08345 913 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms