RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 ITGA4P13612 1032 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 FSHRP23945 695 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 AKAP5P24588 427 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 HOXC13P31276 330 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 DNM2P50570 870 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 DSC1Q08554 894 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 FZD5Q13467 585 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 MLF2Q15773 248 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 FUT10Q6P4F1 479 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NEK8Q86SG6 692 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NECAB1Q8N987 351 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NSUN7Q8NE18 718 aaKnown RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 GSTCDQ8NEC7 633 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 HAS1Q92839 578 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 FGF13Q92913 245 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 TNFRSF25Q93038 417 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NXPE3Q969Y0 559 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NAP1L4Q99733 375 aaKnown RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 DDX23Q9BUQ8 820 aaKnown RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 LTB4R2Q9NPC1 389 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 HCFC1R1Q9NWW0 138 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 KLK14Q9P0G3 267 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 SDK1Q7Z5N4 2213 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 ZMYND10O75800 440 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 PAPLNO95428 1278 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 LARGE1O95461 756 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 SPEM2Q0P670 501 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 LAMTOR4Q0VGL1 99 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 MAPK8IP2Q13387 824 aaPredicted RBP11.27□□□□□ -0.61
RPAP1-212ENST00000569829 ST3GAL2Q16842 350 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 EARS2Q5JPH6 523 aaKnown RBP11.27□□□□□ -0.61
RPAP1-212ENST00000569829 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 RNF149Q8NC42 400 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 ZBTB44Q8NCP5 570 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 KIF2CQ99661 725 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 BCO2Q9BYV7 579 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 RHOBTB2Q9BYZ6 727 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 NXF3Q9H4D5 531 aaKnown RBP11.27□□□□□ -0.61
RPAP1-212ENST00000569829 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 VAV3Q9UKW4 847 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 POLIQ9UNA4 740 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 LIMCH1Q9UPQ0 1083 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 CNOT1A5YKK6 2376 aaKnown RBP11.27□□□□□ -0.61
RPAP1-212ENST00000569829 F5P12259 2224 aa11.27□□□□□ -0.61
RPAP1-212ENST00000569829 B4GALT5O43286 388 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CCNT1O60563 726 aaKnown RBP11.26□□□□□ -0.61
RPAP1-212ENST00000569829 TSPAN1O60635 241 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 LILRB5O75023 590 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 P4HBP07237 508 aaKnown RBP11.26□□□□□ -0.61
RPAP1-212ENST00000569829 PSMC5P62195 406 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 SPIRE1Q08AE8 756 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 TPRG1Q6ZUI0 275 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 ATRIPQ8WXE1 791 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CEP170P1Q96L14 293 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CLSTN3Q9BQT9 956 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 PLEKHA4Q9H4M7 779 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 ZDHHC7Q9NXF8 308 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 FBXO4Q9UKT5 387 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CDV3Q9UKY7 258 aaKnown RBP11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CDH7Q9ULB5 785 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 CNTNAP2Q9UHC6 1331 aa11.26□□□□□ -0.61
RPAP1-212ENST00000569829 A0A087WWV3 80 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 BTBD18B2RXH4 712 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 SPTLC1O15269 473 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 GDF9O60383 454 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 DKC1O60832 514 aaKnown RBP eCLIP11.25□□□□□ -0.61
RPAP1-212ENST00000569829 C8AP07357 584 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 ADRB1P08588 477 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 KRT2P35908 639 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 QARSP47897 775 aaKnown RBP11.25□□□□□ -0.61
RPAP1-212ENST00000569829 ST3GAL1Q11201 340 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 MTAPQ13126 283 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 NR5A1Q13285 461 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 EPHA7Q15375 998 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 USP41Q3LFD5 358 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 ZNF528Q3MIS6 628 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 C8orf34Q49A92 452 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 SRGAP1Q7Z6B7 1085 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 CEP57Q86XR8 500 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 C4orf19Q8IY42 314 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 SLFN12Q8IYM2 578 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 NELL1Q92832 810 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
RPAP1-212ENST00000569829 EPC1Q9H2F5 836 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 DHX33Q9H6R0 707 aaKnown RBP11.25□□□□□ -0.61
RPAP1-212ENST00000569829 XPNPEP1Q9NQW7 623 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 HEBP1Q9NRV9 189 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 ZSCAN32Q9NX65 697 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 RGL1Q9NZL6 768 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 DNMT3BQ9UBC3 853 aaKnown RBP11.25□□□□□ -0.61
RPAP1-212ENST00000569829 FBXW11Q9UKB1 542 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 SSX2IPQ9Y2D8 614 aa11.25□□□□□ -0.61
RPAP1-212ENST00000569829 USP20Q9Y2K6 914 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms