RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SNRNP35Q16560 246 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 MAP9Q49MG5 647 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SWT1Q5T5J6 900 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 KRT39Q6A163 491 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 GPAT2Q6NUI2 795 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SLC39A4Q6P5W5 647 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 GJB7Q6PEY0 223 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 DLK2Q6UY11 383 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 C15orf39Q6ZRI6 1047 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 CYFIP1Q7L576 1253 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ENOSF1Q7L5Y1 443 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TAS1R3Q7RTX0 852 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PLPPR4Q7Z2D5 763 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC60Q8IWA6 550 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 EIF1ADQ8N9N8 165 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SHCBP1Q8NEM2 672 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 LNX1Q8TBB1 728 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ACTRT1Q8TDG2 376 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 HELQQ8TDG4 1101 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 STK32AQ8WU08 396 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 U2AF1L4Q8WU68 220 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SCFD2Q8WU76 684 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PSPC1Q8WXF1 523 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SEPT1Q8WYJ6 367 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 DHX38Q92620 1227 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 CDCA5Q96FF9 252 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PCYT2Q99447 389 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 MPHOSPH6Q99547 160 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 RHOXF2Q9BQY4 288 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PACSIN1Q9BY11 444 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ASCC2Q9H1I8 757 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PCIF1Q9H4Z3 704 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 MROH8Q9H579 483 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF302Q9NR11 478 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 RBPJLQ9UBG7 517 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 AGTPBP1Q9UPW5 1226 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PARP14Q460N5 1801 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 OTOFQ9HC10 1997 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 IGKV6-21A0A0C4DH24 114 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 LRRIQ3A6PVS8 624 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 BHMG1C9JSJ3 638 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NCK2O43639 380 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GAS2O43903 313 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 RTN2O75298 545 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 FARP2O94887 1054 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 KIF4AO95239 1232 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 LDHAP00338 332 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 POTEJP0CG39 1038 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CHRNB2P17787 502 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GLRA2P23416 452 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NF2P35240 595 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NAMPTP43490 491 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NOP2P46087 812 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 AARSP49588 968 aaKnown RBP eCLIP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 MXI1P50539 228 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 STAT5BP51692 787 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 EFNA5P52803 228 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 AP3M2P53677 418 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 MFAP3P55082 362 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GCNT1Q02742 428 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GRM1Q13255 1194 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 PRKG1Q13976 671 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SMC1AQ14683 1233 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 EMC2Q15006 297 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 PSMD6Q15008 389 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 TERF2Q15554 542 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CLUL1Q15846 466 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC181Q5TID7 509 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 IER5Q5VY09 327 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 FAM160B1Q5W0V3 765 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NFRKBQ6P4R8 1299 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC62Q6P9F0 684 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 METTL7BQ6UX53 244 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 ZPBP2Q6X784 338 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SEPT14Q6ZU15 432 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SV2AQ7L0J3 742 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 NT5DC3Q86UY8 548 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CBWD2Q8IUF1 395 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GLYCTKQ8IVS8 523 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GPD1LQ8N335 351 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 RASGEF1CQ8N431 466 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 FBXL13Q8NEE6 735 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 ZSWIM2Q8NEG5 633 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CAGE1Q8TC20 777 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 AENQ8WTP8 325 aaKnown RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 GTF3C2Q8WUA4 911 aaPredicted RBP5.81□□□□□ -1.48
SF3B3-213ENST00000569687 RFFLQ8WZ73 363 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SHC3Q92529 594 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 TAF4BQ92750 862 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SEMA4DQ92854 862 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 HES6Q96HZ4 224 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 FAM167AQ96KS9 214 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 CAPZA3Q96KX2 299 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 KREMEN1Q96MU8 473 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 RPS6KC1Q96S38 1066 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SH2D3AQ9BRG2 576 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 LRRC1Q9BTT6 524 aa5.81□□□□□ -1.48
SF3B3-213ENST00000569687 SELENOOQ9BVL4 669 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms